RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 SUCNR1Q9BXA5 334 aa18.38■□□□□ 0.53
CLN6-224ENST00000638076 CNTNAP3Q9BZ76 1288 aa18.38■□□□□ 0.53
CLN6-224ENST00000638076 DNAJB11Q9UBS4 358 aa18.38■□□□□ 0.53
CLN6-224ENST00000638076 TUBD1Q9UJT1 453 aa18.38■□□□□ 0.53
CLN6-224ENST00000638076 PLK3Q9H4B4 646 aa18.38■□□□□ 0.53
CLN6-224ENST00000638076 PLSCR2Q9NRY7 297 aa18.38■□□□□ 0.53
CLN6-224ENST00000638076 SHANK1Q9Y566 2161 aa18.38■□□□□ 0.53
CLN6-224ENST00000638076 SMPD2O60906 423 aa18.37■□□□□ 0.53
CLN6-224ENST00000638076 NAAAQ02083 359 aa18.37■□□□□ 0.53
CLN6-224ENST00000638076 IL24Q13007 206 aa18.37■□□□□ 0.53
CLN6-224ENST00000638076 MRPL49Q13405 166 aaKnown RBP18.37■□□□□ 0.53
CLN6-224ENST00000638076 SRSF7Q16629 238 aaKnown RBP eCLIP18.37■□□□□ 0.53
CLN6-224ENST00000638076 BAP18Q8IXM2 172 aa18.37■□□□□ 0.53
CLN6-224ENST00000638076 EIF4E3Q8N5X7 224 aaKnown RBP18.37■□□□□ 0.53
CLN6-224ENST00000638076 CNEP1R1Q8N9A8 125 aa18.37■□□□□ 0.53
CLN6-224ENST00000638076 LHX6Q9UPM6 363 aa18.37■□□□□ 0.53
CLN6-224ENST00000638076 C3orf80F5H4A9 247 aa18.37■□□□□ 0.53
CLN6-224ENST00000638076 RHBDL1O75783 438 aa18.37■□□□□ 0.53
CLN6-224ENST00000638076 SCTP09683 121 aa18.37■□□□□ 0.53
CLN6-224ENST00000638076 ZNF585AQ6P3V2 769 aa18.37■□□□□ 0.53
CLN6-224ENST00000638076 FBXW12Q6X9E4 464 aa18.37■□□□□ 0.53
CLN6-224ENST00000638076 C17orf78Q8N4C9 275 aa18.37■□□□□ 0.53
CLN6-224ENST00000638076 SUMF2Q8NBJ7 301 aa18.37■□□□□ 0.53
CLN6-224ENST00000638076 OR2J1Q9GZK6 312 aa18.37■□□□□ 0.53
CLN6-224ENST00000638076 OR51I2Q9H344 312 aa18.37■□□□□ 0.53
CLN6-224ENST00000638076 CDH20Q9HBT6 801 aa18.37■□□□□ 0.53
CLN6-224ENST00000638076 ZSCAN5BA6NJL1 495 aa18.36■□□□□ 0.53
CLN6-224ENST00000638076 J3QW42 95 aa18.36■□□□□ 0.53
CLN6-224ENST00000638076 AQP7O14520 342 aa18.36■□□□□ 0.53
CLN6-224ENST00000638076 BET1O15155 118 aa18.36■□□□□ 0.53
CLN6-224ENST00000638076 GUSBP1Q15486 140 aa18.36■□□□□ 0.53
CLN6-224ENST00000638076 TUSC1Q2TAM9 212 aa18.36■□□□□ 0.53
CLN6-224ENST00000638076 LIAT1Q6ZQX7 453 aa18.36■□□□□ 0.53
CLN6-224ENST00000638076 Q6ZT83 130 aa18.36■□□□□ 0.53
CLN6-224ENST00000638076 LYZL2Q7Z4W2 148 aa18.36■□□□□ 0.53
CLN6-224ENST00000638076 LINC00596Q86U02 117 aa18.36■□□□□ 0.53
CLN6-224ENST00000638076 FAM58AQ8N1B3 248 aa18.36■□□□□ 0.53
CLN6-224ENST00000638076 GLYATL2Q8WU03 294 aa18.36■□□□□ 0.53
CLN6-224ENST00000638076 PKIBQ9C010 78 aa18.36■□□□□ 0.53
CLN6-224ENST00000638076 SLC5A7Q9GZV3 580 aa18.36■□□□□ 0.53
CLN6-224ENST00000638076 KRBOX1C9JBD0 128 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 ERVS71-1P61550 626 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 PPP1CBP62140 327 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 IGF2-ASQ6U949 168 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 LRTM2Q8N967 370 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 CCDC71LQ8N9Z2 235 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 SUN5Q8TC36 379 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 MSI2Q96DH6 328 aaKnown RBP18.35■□□□□ 0.53
CLN6-224ENST00000638076 SPENQ96T58 3664 aaKnown RBP18.35■□□□□ 0.53
CLN6-224ENST00000638076 PRRC2CQ9Y520 2896 aaKnown RBP18.35■□□□□ 0.53
CLN6-224ENST00000638076 HS3ST1O14792 307 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 PHF1O43189 567 aaPredicted RBP18.35■□□□□ 0.53
CLN6-224ENST00000638076 DEDDO75618 318 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 SCGB1D2O95969 90 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 TK1P04183 234 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 HKR1P10072 659 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 NUBP1P53384 320 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 SMCO1Q147U7 214 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 GABRA6Q16445 453 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 CCDC36Q8IYA8 594 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 DNTTIP1Q9H147 329 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 SPACA1Q9HBV2 294 aa18.35■□□□□ 0.53
CLN6-224ENST00000638076 LSM5Q9Y4Y9 91 aaKnown RBP18.35■□□□□ 0.53
CLN6-224ENST00000638076 DIRAS3O95661 229 aa18.34■□□□□ 0.53
CLN6-224ENST00000638076 HERPUD1Q15011 391 aa18.34■□□□□ 0.53
CLN6-224ENST00000638076 FAM209AQ5JX71 171 aa18.34■□□□□ 0.53
CLN6-224ENST00000638076 RDH5Q92781 318 aa18.34■□□□□ 0.53
CLN6-224ENST00000638076 C18orf12Q96KH6 178 aa18.34■□□□□ 0.53
CLN6-224ENST00000638076 TAS2R3Q9NYW6 316 aa18.34■□□□□ 0.53
CLN6-224ENST00000638076 GNRHRP30968 328 aa18.34■□□□□ 0.53
CLN6-224ENST00000638076 KIR2DL2P43627 348 aaPredicted RBP18.34■□□□□ 0.53
CLN6-224ENST00000638076 IL13RA2Q14627 380 aa18.34■□□□□ 0.53
CLN6-224ENST00000638076 C9orf106Q8NAJ2 232 aa18.34■□□□□ 0.53
CLN6-224ENST00000638076 SARAFQ96BY9 339 aa18.34■□□□□ 0.53
CLN6-224ENST00000638076 RTL8AQ9BWD3 113 aa18.34■□□□□ 0.53
CLN6-224ENST00000638076 OR2S2Q9NQN1 319 aa18.34■□□□□ 0.53
CLN6-224ENST00000638076 ZC4H2Q9NQZ6 224 aa18.34■□□□□ 0.53
CLN6-224ENST00000638076 ATP23Q9Y6H3 246 aa18.34■□□□□ 0.53
CLN6-224ENST00000638076 TRAV24A0A0B4J272 114 aa18.33■□□□□ 0.53
CLN6-224ENST00000638076 KIR2DS1A0A191URI9 304 aa18.33■□□□□ 0.53
CLN6-224ENST00000638076 TRDCB7Z8K6 153 aa18.33■□□□□ 0.53
CLN6-224ENST00000638076 J3QT63 122 aa18.33■□□□□ 0.53
CLN6-224ENST00000638076 KIR2DS4P43632 304 aa18.33■□□□□ 0.53
CLN6-224ENST00000638076 KIR2DS1Q14954 304 aa18.33■□□□□ 0.53
CLN6-224ENST00000638076 OR2A2Q6IF42 318 aa18.33■□□□□ 0.53
CLN6-224ENST00000638076 VWA1Q6PCB0 445 aa18.33■□□□□ 0.53
CLN6-224ENST00000638076 LGI3Q8N145 548 aa18.33■□□□□ 0.53
CLN6-224ENST00000638076 MRPL30Q8TCC3 161 aaKnown RBP18.33■□□□□ 0.53
CLN6-224ENST00000638076 TMED6Q8WW62 240 aa18.33■□□□□ 0.53
CLN6-224ENST00000638076 TP53RKQ96S44 253 aa18.33■□□□□ 0.53
CLN6-224ENST00000638076 INO80CQ6PI98 192 aaPredicted RBP18.33■□□□□ 0.52
CLN6-224ENST00000638076 C20orf204Q6ZNR8 217 aa18.33■□□□□ 0.52
CLN6-224ENST00000638076 WDR86Q86TI4 376 aa18.33■□□□□ 0.52
CLN6-224ENST00000638076 SECTM1Q8WVN6 248 aa18.33■□□□□ 0.52
CLN6-224ENST00000638076 K7EPK0 472 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 MPPED1O15442 326 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 RPL12P30050 165 aaKnown RBP18.32■□□□□ 0.52
CLN6-224ENST00000638076 FAM71E2Q8N5Q1 922 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 GALNT11Q8NCW6 608 aa18.32■□□□□ 0.52
CLN6-224ENST00000638076 LHFPL5Q8TAF8 219 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms