RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 ZNF726A6NNF4 738 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 NCBP2LA6PVI3 153 aaKnown RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 ZNF814B7Z6K7 855 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 MGST3O14880 152 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 RBFOX2O43251 390 aaKnown RBP eCLIP2.47□□□□□ -2.01
VIM-210ENST00000637053 ICOSLGO75144 302 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 NDUFS7O75251 213 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 ZNF780AO75290 641 aaPredicted RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 NRASP01111 189 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 HBZP02008 142 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 AMBPP02760 352 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 FABP3P05413 133 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 CELA2AP08217 269 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 MRPL3P09001 348 aaKnown RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 SNRPCP09234 159 aaKnown RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 FAM236CP0DP71 79 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 TDGF1P13385 188 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 CXCL3P19876 107 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 TNFRSF1BP20333 461 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 EVI2AP22794 236 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 RPS3P23396 243 aaKnown RBP eCLIP2.47□□□□□ -2.012e-6■■□□□ 11.5
VIM-210ENST00000637053 PRTN3P24158 256 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 CERS1P27544 350 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 SHC1P29353 583 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 BLVRBP30043 206 aaPredicted RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 SRIP30626 198 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 SAA4P35542 130 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 RAB5CP51148 216 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 RPL26P61254 145 aaKnown RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 RPS18P62269 152 aaKnown RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 TNFAIP6P98066 277 aaPredicted RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 CDK6Q00534 326 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 RIGQ13278 110 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 IHHQ14623 411 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 SLC10A1Q14973 349 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 RHEBQ15382 184 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 SSX1Q16384 188 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 ZNF181Q2M3W8 571 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 IAH1Q2TAA2 248 aaPredicted RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 CEACAM16Q2WEN9 425 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 BEAN1Q3B7T3 259 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 MORN2Q502X0 79 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 TECRLQ5HYJ1 363 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 COL5A1-AS1Q5SY13 56 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 ZNF684Q5T5D7 378 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 AVPI1Q5T686 147 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 RSBN1Q5VWQ0 802 aaPredicted RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 SPATA31B1PQ5VZV4 182 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 PVRIGQ6DKI7 326 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 IGFL2Q6UWQ7 119 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 APOOLQ6UXV4 268 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 MRPL55Q7Z7F7 128 aaKnown RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 TMEM150AQ86TG1 271 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 NAA40Q86UY6 237 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 OOSP2Q86WS3 158 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 PIANPQ8IYJ0 282 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 SLC22A15Q8IZD6 547 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 TCTEX1D1Q8N7M0 179 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 GPR26Q8NDV2 337 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 OR2T33Q8NG76 320 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 OR11H6Q8NGC7 330 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 OR52N5Q8NH56 324 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 OR5K1Q8NHB7 308 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 VN1R17PQ8TDU5 208 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 ZNF418Q8TF45 676 aaPredicted RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 PHLDA1Q8WV24 401 aaPredicted RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 MBD3L1Q8WWY6 194 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 SRSF12Q8WXF0 261 aaKnown RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 RBPMSQ93062 196 aaKnown RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 ISOC1Q96CN7 298 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 GMPPAQ96IJ6 420 aaPredicted RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 TMEM101Q96IK0 257 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 SMIM8Q96KF7 97 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 ATOH8Q96SQ7 321 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 PSMG3Q9BT73 122 aaPredicted RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 TM2D2Q9BX73 214 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 C20orf85Q9H1P6 137 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 TAF9BQ9HBM6 251 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 AKIP1Q9NQ31 210 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 MMP26Q9NRE1 261 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 SERTAD4Q9NUC0 356 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 ACER3Q9NUN7 267 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 MED9Q9NWA0 146 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 RBFOX1Q9NWB1 397 aaKnown RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 MRPL27Q9P0M9 148 aaKnown RBP2.47□□□□□ -2.01
VIM-210ENST00000637053 ANXA10Q9UJ72 324 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 VDAC3Q9Y277 283 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 V9GYS6 101 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 MAP3K1Q13233 1512 aa2.47□□□□□ -2.01
VIM-210ENST00000637053 GRIN2BQ13224 1484 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 NALCNQ8IZF0 1738 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 SPATA31D1Q6ZQQ2 1576 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 MYOM3Q5VTT5 1437 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 TRAV38-1A0A0B4J264 116 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 hADV38S2A0JD32 116 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 GAGE12JA6NER3 117 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 UNC119BA6NIH7 251 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 C1orf196B1AJZ1 125 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 ZNF587BE7ETH6 402 aa2.46□□□□□ -2.02
VIM-210ENST00000637053 INMT-MINDY4F8WBC2 141 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms