RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 C8orf46Q8TAG6 207 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 NDNFQ8TB73 568 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 LGALS14Q8TCE9 139 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 WDFY2Q96P53 400 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 NEDD4LQ96PU5 975 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 TMEM246Q9BRR3 403 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 KRTAP9-3Q9BYQ3 159 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 SLIRPQ9GZT3 109 aaKnown RBP5.6□□□□□ -1.51
UPF3B-205ENST00000636792 NXF2Q9GZY0 626 aaKnown RBP5.6□□□□□ -1.51
UPF3B-205ENST00000636792 LPAR5Q9H1C0 372 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 MMP27Q9H306 513 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 RIMS4Q9H426 269 aaPredicted RBP5.6□□□□□ -1.51
UPF3B-205ENST00000636792 RNF167Q9H6Y7 350 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 DIABLOQ9NR28 239 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 RHBDL2Q9NX52 303 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 PTTG2Q9NZH5 202 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 OR5V1Q9UGF6 321 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 PCDHB10Q9UN67 800 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 ING4Q9UNL4 249 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 CACNG2Q9Y698 323 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 CR1P17927 2039 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 YLPM1P49750 1951 aaKnown RBP5.6□□□□□ -1.51
UPF3B-205ENST00000636792 FBN2P35556 2912 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 APCP25054 2843 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 HECTD1Q9ULT8 2610 aa5.6□□□□□ -1.51
UPF3B-205ENST00000636792 CREBBPQ92793 2442 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.59□□□□□ -1.51
UPF3B-205ENST00000636792 DCHS2Q6V1P9 2916 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 IGHV4-30-2A0A087WSY4 118 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 A0A096LNT2 108 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 TMEM272A0A1B0GTI8 110 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 RFPL4AA6NLU0 287 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 FOXI3A8MTJ6 420 aaPredicted RBP5.59□□□□□ -1.51
UPF3B-205ENST00000636792 RFPL4AL1F8VTS6 287 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 K7N7A8 449 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 WNT9BO14905 357 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 TMPRSS2O15393 492 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 ADAM20O43506 726 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 NDUFB3O43676 98 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 ZNF737O75373 536 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 CLPXO76031 633 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 OR7C1O76099 320 aaPredicted RBP5.59□□□□□ -1.51
UPF3B-205ENST00000636792 LY6HO94772 140 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 DIRAS3O95661 229 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 OR2H2O95918 312 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 RBP4P02753 201 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 TK1P04183 234 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 LIPFP07098 398 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 GSTP1P09211 210 aaKnown RBP5.59□□□□□ -1.51
UPF3B-205ENST00000636792 WNT2P09544 360 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 CLEC2LP0C7M8 214 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 ZNF44P15621 663 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 FUT3P21217 361 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 PTBP1P26599 531 aaKnown RBP eCLIP5.59□□□□□ -1.51
UPF3B-205ENST00000636792 PRDX2P32119 198 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 S100A5P33763 92 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 TALDO1P37837 337 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 PITPNBP48739 271 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 GZMKP49863 264 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 GNB2P62879 340 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 IKZF1Q13422 519 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 CARTPTQ16568 116 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 SRSF7Q16629 238 aaKnown RBP eCLIP5.59□□□□□ -1.51
UPF3B-205ENST00000636792 PNLIPRP3Q17RR3 467 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 DMRTC1Q5HYR2 192 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 METAP1DQ6UB28 335 aaPredicted RBP5.59□□□□□ -1.51
UPF3B-205ENST00000636792 C1QL2Q7Z5L3 287 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 GAPTQ8N292 157 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 KIR3DL3Q8N743 410 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 TMEM104Q8NE00 496 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 CLDND2Q8NHS1 167 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 FAM216AQ8WUB2 273 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 GAFA1Q96PS6 74 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 SSBP3Q9BWW4 388 aaPredicted RBP5.59□□□□□ -1.51
UPF3B-205ENST00000636792 BARHL1Q9BZE3 327 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 SELENOIQ9C0D9 397 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 WDR13Q9H1Z4 485 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 CLN8Q9UBY8 286 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 OPN4Q9UHM6 478 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 PEX16Q9Y5Y5 336 aa5.59□□□□□ -1.51
UPF3B-205ENST00000636792 CRYBG3Q68DQ2 2970 aa5.58□□□□□ -1.52
UPF3B-205ENST00000636792 SETXQ7Z333 2677 aaKnown RBP5.58□□□□□ -1.52
UPF3B-205ENST00000636792 TRBV6-6A0A0A6YYG2 114 aa5.58□□□□□ -1.52
UPF3B-205ENST00000636792 TRAV20A0A0B4J274 112 aa5.58□□□□□ -1.52
UPF3B-205ENST00000636792 IGHV3-64DA0A0J9YX35 117 aa5.58□□□□□ -1.52
UPF3B-205ENST00000636792 hCG_1809904A0A1W2PP81 198 aa5.58□□□□□ -1.52
UPF3B-205ENST00000636792 A0A1W2PPE2 198 aa5.58□□□□□ -1.52
UPF3B-205ENST00000636792 A0A1W2PR64 198 aa5.58□□□□□ -1.52
UPF3B-205ENST00000636792 A0A1W2PRV1 198 aa5.58□□□□□ -1.52
UPF3B-205ENST00000636792 B4DSR2 109 aa5.58□□□□□ -1.52
UPF3B-205ENST00000636792 MCRIP1C9JLW8 97 aa5.58□□□□□ -1.52
UPF3B-205ENST00000636792 LYNX1G3V0Z9 82 aa5.58□□□□□ -1.52
UPF3B-205ENST00000636792 RAB27BO00194 218 aa5.58□□□□□ -1.52
UPF3B-205ENST00000636792 SLC33A1O00400 549 aaPredicted RBP5.58□□□□□ -1.52
UPF3B-205ENST00000636792 MFNGO00587 321 aa5.58□□□□□ -1.52
UPF3B-205ENST00000636792 GEMIN2O14893 280 aaKnown RBP5.58□□□□□ -1.52
UPF3B-205ENST00000636792 DEGS1O15121 323 aa5.58□□□□□ -1.52
UPF3B-205ENST00000636792 XRCC3O43542 346 aa5.58□□□□□ -1.52
UPF3B-205ENST00000636792 ENSAO43768 121 aaKnown RBP5.58□□□□□ -1.52
UPF3B-205ENST00000636792 GYPAP02724 150 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms