RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 GPER1Q99527 375 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 HSPB9Q9BQS6 159 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 PDCD10Q9BUL8 212 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 EBPLQ9BY08 206 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 TMEM126AQ9H061 195 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 NANOGQ9H9S0 305 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 SH2D2AQ9NP31 389 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 TAAR2Q9P1P5 351 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 NTNG1Q9Y2I2 539 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 POLR1DQ9Y2S0 133 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.37□□□□□ -2.03
PSPC1-208ENST00000635562 NCAPD3P42695 1498 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 ITGB4P16144 1822 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 PSME4Q14997 1843 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 KIF13BQ9NQT8 1826 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 DOCK3Q8IZD9 2030 aa2.37□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF106Q9H2Y7 1883 aaKnown RBP2.37□□□□□ -2.03
PSPC1-208ENST00000635562 NPHP4O75161 1426 aaPredicted RBP2.36□□□□□ -2.03
PSPC1-208ENST00000635562 A0A0U1RQV1 116 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 A0A1B0GX51 115 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 C20orf202A1L168 122 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 TRAPPC13A5PLN9 417 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 NCBP2LA6PVI3 153 aaKnown RBP2.36□□□□□ -2.03
PSPC1-208ENST00000635562 FOXI3A8MTJ6 420 aaPredicted RBP2.36□□□□□ -2.03
PSPC1-208ENST00000635562 BTNL10A8MVZ5 291 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 SNURFLB1AK76 121 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 TCP10L2B9ZVM9 353 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 G3V2L1 256 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 NTN3O00634 580 aaPredicted RBP2.36□□□□□ -2.03
PSPC1-208ENST00000635562 ATP6V0E1O15342 81 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 ICOSLGO75144 302 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 TTRP02766 147 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 IL3P08700 152 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 CD79AP11912 226 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 CDK2P24941 298 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 SHC1P29353 583 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 MIPP30301 263 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 TSPOP30536 169 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 GGT2P36268 569 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 MDH2P40926 338 aaKnown RBP2.36□□□□□ -2.03
PSPC1-208ENST00000635562 KIR2DS2P43631 304 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 REG1BP48304 166 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 TDGF1P3P51864 188 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 RND3P61587 244 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 RPS28P62857 69 aaKnown RBP2.36□□□□□ -2.03
PSPC1-208ENST00000635562 MRPS10P82664 201 aaKnown RBP2.36□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF154Q13106 437 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 P2RY6Q15077 328 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 SHHQ15465 462 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 OR8B8Q15620 311 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 LTC4SQ16873 150 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 CNPY1Q3B7I2 92 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 UNC50Q53HI1 259 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 MS4A13Q5J8X5 152 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 STEAP4Q687X5 459 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 REP15Q6BDI9 236 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 AGTRAPQ6RW13 159 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 Q6ZVH6 145 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 NEGR1Q7Z3B1 354 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 CEACAM19Q7Z692 300 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 DEFB128Q7Z7B8 93 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 LINC01551Q86U37 167 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF329Q86UD4 541 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 HOGA1Q86XE5 327 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 CTAGE3PQ8IX95 158 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 SLC35F6Q8N357 371 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF843Q8N446 348 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 TCEANCQ8N8B7 351 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF557Q8N988 423 aaPredicted RBP2.36□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF383Q8NA42 475 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF485Q8NCK3 441 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 BEST4Q8NFU0 473 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 OR52L1Q8NGH7 329 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 OR51A2Q8NGJ7 313 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 OR10G7Q8NGN6 311 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 OR4C6Q8NH72 309 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 AGAP11Q8TF27 550 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 SSC4DQ8WTU2 575 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 PTX4Q96A99 478 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 PIK3IP1Q96FE7 263 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 AURKBQ96GD4 344 aaPredicted RBP2.36□□□□□ -2.03
PSPC1-208ENST00000635562 SEC22AQ96IW7 307 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 FCRL1Q96LA6 429 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF354BQ96LW1 612 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 LINC00477Q96M19 166 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 CCDC115Q96NT0 180 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 GPR82Q96P67 336 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 OR52E6Q96RD3 313 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 KCTD14Q9BQ13 255 aaPredicted RBP2.36□□□□□ -2.03
PSPC1-208ENST00000635562 MRPL45Q9BRJ2 306 aaKnown RBP2.36□□□□□ -2.03
PSPC1-208ENST00000635562 FAAP24Q9BTP7 215 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 ISG20L2Q9H9L3 353 aaKnown RBP2.36□□□□□ -2.03
PSPC1-208ENST00000635562 UBE2TQ9NPD8 197 aaPredicted RBP2.36□□□□□ -2.03
PSPC1-208ENST00000635562 CISHQ9NSE2 258 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 TAS2R16Q9NYV7 291 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 HSPB8Q9UJY1 196 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 PRNDQ9UKY0 176 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 RAB22AQ9UL26 194 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 ZFP30Q9Y2G7 519 aa2.36□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF780BQ9Y6R6 833 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms