RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 DEGS1O15121 323 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 KCNAB3O43448 404 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 PSPNO60542 156 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 HTR3BO95264 441 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 CSTBP04080 98 aaKnown RBP12.72□□□□□ -0.37
LINC00339-209ENST00000635450 MAS1P04201 325 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 HSMCR30P0CW71 290 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 OR3A4PP47883 348 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 RAG2P55895 527 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 MEF2CQ06413 473 aaPredicted RBP12.72□□□□□ -0.37
LINC00339-209ENST00000635450 GPR50Q13585 617 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 DOC2BQ14184 412 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 JAGN1Q8N5M9 183 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 CHST4Q8NCG5 386 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 WFDC12Q8WWY7 111 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 NR1H4Q96RI1 486 aaPredicted RBP12.72□□□□□ -0.37
LINC00339-209ENST00000635450 TMED9Q9BVK6 235 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 NOX4Q9NPH5 578 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 SF3B6Q9Y3B4 125 aaKnown RBP12.72□□□□□ -0.37
LINC00339-209ENST00000635450 FAM96BQ9Y3D0 163 aa12.72□□□□□ -0.37
LINC00339-209ENST00000635450 NOTCH1P46531 2555 aa12.71□□□□□ -0.37
LINC00339-209ENST00000635450 CDRT1O95170 752 aa12.71□□□□□ -0.37
LINC00339-209ENST00000635450 CCL3L1P16619 93 aa12.71□□□□□ -0.37
LINC00339-209ENST00000635450 LMO1P25800 156 aa12.71□□□□□ -0.37
LINC00339-209ENST00000635450 UBE2E1P51965 193 aa12.71□□□□□ -0.37
LINC00339-209ENST00000635450 KRTAP10-3P60369 221 aa12.71□□□□□ -0.37
LINC00339-209ENST00000635450 ERVFRD-1P60508 538 aa12.71□□□□□ -0.37
LINC00339-209ENST00000635450 ZNF273Q14593 569 aa12.71□□□□□ -0.37
LINC00339-209ENST00000635450 IL13RA2Q14627 380 aa12.71□□□□□ -0.37
LINC00339-209ENST00000635450 ACSM3Q53FZ2 586 aa12.71□□□□□ -0.37
LINC00339-209ENST00000635450 ASCL4Q6XD76 172 aa12.71□□□□□ -0.37
LINC00339-209ENST00000635450 OR4S1Q8NGB4 309 aa12.71□□□□□ -0.37
LINC00339-209ENST00000635450 OR10K1Q8NGX5 313 aa12.71□□□□□ -0.37
LINC00339-209ENST00000635450 ZNF714Q96N38 554 aa12.71□□□□□ -0.37
LINC00339-209ENST00000635450 NKX3-1Q99801 234 aaPredicted RBP12.71□□□□□ -0.37
LINC00339-209ENST00000635450 HEXA-AS1Q9H8Q6 139 aa12.71□□□□□ -0.37
LINC00339-209ENST00000635450 ISYNA1Q9NPH2 558 aa12.71□□□□□ -0.37
LINC00339-209ENST00000635450 KIAA2026Q5HYC2 2103 aa12.71□□□□□ -0.38
LINC00339-209ENST00000635450 NPFFO15130 113 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 ZNF780AO75290 641 aaPredicted RBP12.7□□□□□ -0.38
LINC00339-209ENST00000635450 FBP1P09467 338 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 ZNF728P0DKX0 622 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 SERPINA2P20848 420 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 ERP29P30040 261 aaKnown RBP12.7□□□□□ -0.38
LINC00339-209ENST00000635450 OR3A1P47881 315 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 MLLT11Q13015 90 aaPredicted RBP12.7□□□□□ -0.38
LINC00339-209ENST00000635450 GPR176Q14439 515 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 LIPKQ5VXJ0 399 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 Q6P435 159 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 TRAPPC6BQ86SZ2 158 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 CDH26Q8IXH8 852 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 TPRX1Q8N7U7 411 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 NKAIN3Q8N8D7 197 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 OR51T1Q8NGJ9 327 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 TNFRSF14Q92956 283 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 PPA2Q9H2U2 334 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 ZNF696Q9H7X3 374 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 TCF7L1Q9HCS4 588 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 IL36GQ9NZH8 169 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 LINC00312Q9Y6C7 94 aa12.7□□□□□ -0.38
LINC00339-209ENST00000635450 A0A0G2JK05 382 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 MEIOCA2RUB1 952 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 MEGF11A6BM72 1044 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 MAGEA13PA6NCF6 341 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 SLC33A1O00400 549 aaPredicted RBP12.69□□□□□ -0.38
LINC00339-209ENST00000635450 PIN1P1O15428 100 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 DENRO43583 198 aaKnown RBP12.69□□□□□ -0.38
LINC00339-209ENST00000635450 GPR137BO60478 399 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 PAHP00439 452 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 P2RX3P56373 397 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 GABARAPL2P60520 117 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 TRAM1Q15629 374 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 TAF9Q16594 264 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 SLC22A6Q4U2R8 563 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 AWAT2Q6E213 333 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 UNQ9370/PRO34162Q6UXP9 181 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 LDLRAD3Q86YD5 345 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 OSR2Q8N2R0 312 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 TMEM86BQ8N661 226 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 Q8NFD4 153 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 SSMEM1Q8WWF3 244 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 ST3GAL6Q9Y274 331 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 MRPS28Q9Y2Q9 187 aaKnown RBP12.69□□□□□ -0.38
LINC00339-209ENST00000635450 MMP24Q9Y5R2 645 aa12.69□□□□□ -0.38
LINC00339-209ENST00000635450 TRGV10A0A0A0MS01 117 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 MEX3AA1L020 520 aaKnown RBP12.68□□□□□ -0.38
LINC00339-209ENST00000635450 POM121CA8CG34 1229 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 C17orf98A8MV24 154 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 RBP4P02753 201 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 CSN2P05814 226 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 PSMA1P25786 263 aaKnown RBP12.68□□□□□ -0.38
LINC00339-209ENST00000635450 MAP2K4P45985 399 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 IER3P46695 156 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 LGALS4P56470 323 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 TPBGQ13641 420 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 TBCEQ15813 527 aaPredicted RBP12.68□□□□□ -0.38
LINC00339-209ENST00000635450 PIGYQ3MUY2 71 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 HSD17B12Q53GQ0 312 aa12.68□□□□□ -0.38
LINC00339-209ENST00000635450 PAN3Q58A45 887 aaKnown RBP12.68□□□□□ -0.38
LINC00339-209ENST00000635450 KRBOX4Q5JUW0 171 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms