RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 KLRD1Q13241 179 aa12.71□□□□□ -0.37
SNRNP48-203ENST00000634363 TPBGQ13641 420 aa12.71□□□□□ -0.37
SNRNP48-203ENST00000634363 TRAM1Q15629 374 aa12.71□□□□□ -0.37
SNRNP48-203ENST00000634363 ACSM3Q53FZ2 586 aa12.71□□□□□ -0.37
SNRNP48-203ENST00000634363 SPIN3Q5JUX0 258 aa12.71□□□□□ -0.37
SNRNP48-203ENST00000634363 SLC35E4Q6ICL7 350 aa12.71□□□□□ -0.37
SNRNP48-203ENST00000634363 RNF144BQ7Z419 303 aa12.71□□□□□ -0.37
SNRNP48-203ENST00000634363 ASCC1Q8N9N2 400 aaKnown RBP12.71□□□□□ -0.37
SNRNP48-203ENST00000634363 S100A13Q99584 98 aa12.71□□□□□ -0.37
SNRNP48-203ENST00000634363 PPA2Q9H2U2 334 aa12.71□□□□□ -0.37
SNRNP48-203ENST00000634363 ZNRD1Q9P1U0 126 aa12.71□□□□□ -0.37
SNRNP48-203ENST00000634363 VPREB3Q9UKI3 123 aa12.71□□□□□ -0.37
SNRNP48-203ENST00000634363 MEIOCA2RUB1 952 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 RNASEK-C17orf49H0YIS7 233 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 NPFFO15130 113 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 TSPAN9O75954 239 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 HAND1O96004 215 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 MAS1P04201 325 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 CHRM2P08172 466 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 BMXP51813 675 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 GUCA2AQ02747 115 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 COL10A1Q03692 680 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 EMX1Q04741 257 aaPredicted RBP12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 RSU1Q15404 277 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 HIST2H2BDQ6DRA6 164 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 CRIP3Q6Q6R5 217 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 PNKDQ8N490 385 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 NKAIN3Q8N8D7 197 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 LY6G5BQ8NDX9 201 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 PXT1Q8NFP0 134 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 FCGR1BQ92637 280 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 TMEM203Q969S6 136 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 DCTN5Q9BTE1 182 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 HMG20AQ9NP66 347 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 IL36RNQ9UBH0 155 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 GSTK1Q9Y2Q3 226 aa12.7□□□□□ -0.38
SNRNP48-203ENST00000634363 TRBV23-1A0A0A0MS06 115 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 A0A1W2PQ09 198 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 MAGEA13PA6NCF6 341 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 G3V4G9 280 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 PIN1P1O15428 100 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 PRB2P02812 416 aaPredicted RBP12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 CALCBP10092 127 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 PTGFRP43088 359 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 OR3A4PP47883 348 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 MTNR1BP49286 362 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 RPS25P62851 125 aaKnown RBP12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 INSL4Q14641 139 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 ZNF146Q15072 292 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 KCTD21Q4G0X4 260 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 HSD17B12Q53GQ0 312 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 ZNF773Q6PK81 442 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 Q6ZTK2 550 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 CEACAM19Q7Z692 300 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 SPARTQ8N0X7 666 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 JAGN1Q8N5M9 183 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 C11orf44Q8N8P7 122 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 NKX3-1Q99801 234 aaPredicted RBP12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 FAM234AQ9H0X4 552 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 EXOSC4Q9NPD3 245 aaKnown RBP12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 LRRC42Q9Y546 428 aa12.69□□□□□ -0.38
SNRNP48-203ENST00000634363 MEGF11A6BM72 1044 aa12.68□□□□□ -0.38
SNRNP48-203ENST00000634363 TK1P04183 234 aa12.68□□□□□ -0.38
SNRNP48-203ENST00000634363 PSMB9P28065 219 aa12.68□□□□□ -0.38
SNRNP48-203ENST00000634363 DUSP1P28562 367 aa12.68□□□□□ -0.38
SNRNP48-203ENST00000634363 GABRA5P31644 462 aa12.68□□□□□ -0.38
SNRNP48-203ENST00000634363 SAA4P35542 130 aa12.68□□□□□ -0.38
SNRNP48-203ENST00000634363 METAP1DQ6UB28 335 aaPredicted RBP12.68□□□□□ -0.38
SNRNP48-203ENST00000634363 UNQ9370/PRO34162Q6UXP9 181 aa12.68□□□□□ -0.38
SNRNP48-203ENST00000634363 GDPD3Q7L5L3 318 aa12.68□□□□□ -0.38
SNRNP48-203ENST00000634363 FAM185AQ8N0U4 392 aa12.68□□□□□ -0.38
SNRNP48-203ENST00000634363 Q8N7P7 452 aa12.68□□□□□ -0.38
SNRNP48-203ENST00000634363 C8orf46Q8TAG6 207 aa12.68□□□□□ -0.38
SNRNP48-203ENST00000634363 DMRTB1Q96MA1 342 aa12.68□□□□□ -0.38
SNRNP48-203ENST00000634363 METTL9Q9H1A3 318 aa12.68□□□□□ -0.38
SNRNP48-203ENST00000634363 ING4Q9UNL4 249 aa12.68□□□□□ -0.38
SNRNP48-203ENST00000634363 SIGLEC9Q9Y336 463 aa12.68□□□□□ -0.38
SNRNP48-203ENST00000634363 K7N7A8 449 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 SH2D1BO14796 132 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 SC5DO75845 299 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 ARL6IP5O75915 188 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 CDRT1O95170 752 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 HTR3BO95264 441 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 CSTBP04080 98 aaKnown RBP12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 ZNF44P15621 663 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 GABRR1P24046 479 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 LY6EQ16553 131 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 FBLN7Q53RD9 439 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 FAM27D1Q5T7N8 215 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 UBE2UQ5VVX9 321 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 ELP2Q6IA86 826 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 C1orf122Q6ZSJ8 110 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 CDH26Q8IXH8 852 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 OR8H2Q8N162 312 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 OR5D13Q8NGL4 314 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 PPP1R35Q8TAP8 253 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 PHYHIPQ92561 330 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 SNX22Q96L94 193 aa12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 SEBOXQ9HB31 216 aaPredicted RBP12.67□□□□□ -0.38
SNRNP48-203ENST00000634363 PCDHB16Q9NRJ7 776 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms