RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 IGSF9BQ9UPX0 1349 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 TDRD15B5MCY1 1934 aaKnown RBP4.01□□□□□ -1.77
SDCBP-213ENST00000630925 IGHV2OR16-5A0A0B4J2B6 119 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 SNURFLB1AK76 121 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 DEGS1O15121 323 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 ICOSLGO75144 302 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 CD99P14209 185 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 ZNF708P17019 499 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 TSPOP30536 169 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 LIM2P55344 173 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 PIGPP57054 158 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 BAXQ07812 192 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 CLINT1Q14677 625 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 OCIAD2Q56VL3 154 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 PIK3CD-AS1Q5SR53 167 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 TRNP1Q6NT89 227 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 ZNF613Q6PF04 617 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 PRR22Q8IZ63 422 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 PNKDQ8N490 385 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 TCEANCQ8N8B7 351 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 PNLDC1Q8NA58 520 aaKnown RBP4.01□□□□□ -1.77
SDCBP-213ENST00000630925 CHST4Q8NCG5 386 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 ZNF485Q8NCK3 441 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 SLC30A7Q8NEW0 376 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 RPUSD4Q96CM3 377 aaKnown RBP4.01□□□□□ -1.77
SDCBP-213ENST00000630925 FCRL1Q96LA6 429 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 OR7D2Q96RA2 312 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 MRPL45Q9BRJ2 306 aaKnown RBP4.01□□□□□ -1.77
SDCBP-213ENST00000630925 EBPLQ9BY08 206 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 RBM22Q9NW64 420 aaKnown RBP eCLIP4.01□□□□□ -1.77
SDCBP-213ENST00000630925 ING1Q9UK53 422 aaPredicted RBP4.01□□□□□ -1.77
SDCBP-213ENST00000630925 DNAJC12Q9UKB3 198 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 PYCARDQ9ULZ3 195 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 POLR1DQ9Y2S0 133 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 NKX2-6A6NCS4 301 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 TCP10L2B9ZVM9 353 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 CLDN14O95500 239 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 CCNE2O96020 404 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 CCL5P13501 91 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 GNB3P16520 340 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 CHRNB2P17787 502 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 SHC1P29353 583 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 SUB1P53999 127 aaKnown RBP eCLIP4.01□□□□□ -1.772e-6■■■■□ 20.8
SDCBP-213ENST00000630925 BIDP55957 195 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 IHHQ14623 411 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 TAF9Q16594 264 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 DUSP6Q16828 381 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 TECRLQ5HYJ1 363 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 MS4A13Q5J8X5 152 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 FNBP1LQ5T0N5 605 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 C1orf194Q5T5A4 169 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 ZNF626Q68DY1 528 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 IGFL2Q6UWQ7 119 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 LINC00114Q6XXX2 140 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 Q6ZTK2 550 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 STRADAQ7RTN6 431 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 KLHDC8BQ8IXV7 354 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 OR2K2Q8NGT1 345 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 OR51Q1Q8NH59 317 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 NPRL2Q8WTW4 380 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 TMEM255BQ8WV15 326 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 TMED6Q8WW62 240 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 PTX4Q96A99 478 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 GFM1Q96RP9 751 aaKnown RBP4.01□□□□□ -1.77
SDCBP-213ENST00000630925 PLA2G12BQ9BX93 195 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 COA1Q9GZY4 146 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 UBE2TQ9NPD8 197 aaPredicted RBP4.01□□□□□ -1.77
SDCBP-213ENST00000630925 MED29Q9NX70 200 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 HSPB8Q9UJY1 196 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 FBXO7Q9Y3I1 522 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 RTL1A6NKG5 1358 aa4.01□□□□□ -1.77
SDCBP-213ENST00000630925 RIC1Q4ADV7 1423 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 SPTBN4Q9H254 2564 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 H3BSA7 217 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 GYG2O15488 501 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 ZNF207O43670 478 aaKnown RBP4□□□□□ -1.77
SDCBP-213ENST00000630925 WDR1O75083 606 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 RENP00797 406 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 UBBP0CG47 229 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 PKIAP61925 76 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 ECH1Q13011 328 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 QPRTQ15274 297 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 NANOGP8Q6NSW7 305 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 TFAP2EQ6VUC0 442 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 RNF165Q6ZSG1 346 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 FA2HQ7L5A8 372 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 NEGR1Q7Z3B1 354 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 OAFQ86UD1 273 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 P2RY8Q86VZ1 359 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 C4orf33Q8N1A6 199 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 ZNF557Q8N988 423 aaPredicted RBP4□□□□□ -1.77
SDCBP-213ENST00000630925 OR52L1Q8NGH7 329 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 CANT1Q8WVQ1 401 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 SRSF12Q8WXF0 261 aaKnown RBP4□□□□□ -1.77
SDCBP-213ENST00000630925 CCDC115Q96NT0 180 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 RTBDNQ9BSG5 229 aaPredicted RBP4□□□□□ -1.77
SDCBP-213ENST00000630925 RIOK2Q9BVS4 552 aaKnown RBP4□□□□□ -1.77
SDCBP-213ENST00000630925 NANOGQ9H9S0 305 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 PRNDQ9UKY0 176 aa4□□□□□ -1.77
SDCBP-213ENST00000630925 FZD1Q9UP38 647 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms