RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 OPN4Q9UHM6 478 aa10.68□□□□□ -0.7
SYNGAP1-207ENST00000628646 SPENQ96T58 3664 aaKnown RBP10.68□□□□□ -0.7
SYNGAP1-207ENST00000628646 A0A0D9SG52 128 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 ARPC5O15511 151 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 SMPD2O60906 423 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 ESCO2Q56NI9 601 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 AQP3Q92482 292 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 ADAT3Q96EY9 351 aaPredicted RBP10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 POFUT1Q9H488 388 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 SPRY1O43609 319 aaPredicted RBP10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 MARVELD3Q96A59 401 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 C1orf147Q96MC9 270 aaPredicted RBP10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 SOX7Q9BT81 388 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 ZNF319Q9P2F9 582 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 CACNA1DQ01668 2161 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 DPRXA6NFQ7 191 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 MMP7P09237 267 aaPredicted RBP10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 SORDQ00796 357 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 OPCMLQ14982 345 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 MPPED2Q15777 294 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 GRK1Q15835 563 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 NHLRC3Q5JS37 347 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 LY6G6FQ5SQ64 297 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 PCSK4Q6UW60 755 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 NUDCD2Q8WVJ2 157 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 NUDT16L1Q9BRJ7 211 aaKnown RBP10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 ALX4Q9H161 411 aaPredicted RBP10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 FN3KRPQ9HA64 309 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 ATPIF1Q9UII2 106 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 MPC1Q9Y5U8 109 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 NCKAP5O14513 1909 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 RAB27BO00194 218 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 HIST1H1DP16402 221 aaKnown RBP10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 UBE2MP61081 183 aaKnown RBP10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 MOGAT3Q86VF5 341 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 C1orf174Q8IYL3 243 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 OR5T2Q8NGG2 359 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 H1FXQ92522 213 aaKnown RBP10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 C1orf123Q9NWV4 160 aa10.67□□□□□ -0.7
SYNGAP1-207ENST00000628646 MCRIP1C9JLW8 97 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 C3orf80F5H4A9 247 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 HSPA12AO43301 675 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 CGAP01215 116 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 OR4E1P0C645 316 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 PRKACAP17612 351 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 ATP5J2P56134 94 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 CLLU1Q5K131 121 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 OR13C8Q8NGS7 320 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 MRPS24Q96EL2 167 aaKnown RBP10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 CCL19Q99731 98 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 NCOA6Q14686 2063 aaPredicted RBP10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 DHRS7CA6NNS2 312 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 GNB3P16520 340 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 ZNF260Q3ZCT1 412 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 ZNF546Q86UE3 836 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 SPACA1Q9HBV2 294 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 PMP2P02689 132 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 PRAMEF6Q5VXH4 476 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 ZCCHC24Q8N2G6 241 aaKnown RBP10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 TMEM185AQ8NFB2 350 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 TINAGL1Q9GZM7 467 aaPredicted RBP10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 CXXC4Q9H2H0 198 aa10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 MYOZ1Q9NP98 299 aaPredicted RBP10.66□□□□□ -0.7
SYNGAP1-207ENST00000628646 CSPG4Q6UVK1 2322 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 WRBO00258 174 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 CDIPTO14735 213 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 ZNF35P13682 527 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 NDUFB7P17568 137 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 DUSP1P28562 367 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 TERB2Q8NHR7 220 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 ZNF471Q9BX82 626 aaPredicted RBP10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 RDH8Q9NYR8 311 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 B9A039 149 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 VSIG8P0DPA2 414 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 PVALBP20472 110 aaPredicted RBP10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 CDKN1AP38936 164 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 EDDM3BP56851 147 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 EDDM3AQ14507 147 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 LRRC37A5PQ49AS3 106 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 LRRC29Q8WV35 223 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 NEUROG1Q92886 237 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 CHST5Q9GZS9 411 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 GSKIPQ9P0R6 139 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 F5H0A9 414 aaPredicted RBP10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 SIX6O95475 246 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 MPV17P39210 176 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 TOR2AQ5JU69 321 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 SLAMF9Q96A28 289 aa10.65□□□□□ -0.7
SYNGAP1-207ENST00000628646 NKX6-3A6NJ46 265 aa10.64□□□□□ -0.71
SYNGAP1-207ENST00000628646 SHOXO15266 292 aa10.64□□□□□ -0.71
SYNGAP1-207ENST00000628646 PLAUP00749 431 aa10.64□□□□□ -0.71
SYNGAP1-207ENST00000628646 IGLV3-1P01715 115 aa10.64□□□□□ -0.71
SYNGAP1-207ENST00000628646 HEXAP06865 529 aa10.64□□□□□ -0.71
SYNGAP1-207ENST00000628646 PRF1P14222 555 aa10.64□□□□□ -0.71
SYNGAP1-207ENST00000628646 MPZP25189 248 aa10.64□□□□□ -0.71
SYNGAP1-207ENST00000628646 S100A11P31949 105 aa10.64□□□□□ -0.71
SYNGAP1-207ENST00000628646 RBM39Q14498 530 aaKnown RBP10.64□□□□□ -0.71
SYNGAP1-207ENST00000628646 SPIN3Q5JUX0 258 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms