RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 TBPP20226 339 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 SNU13P55769 128 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 BTG1P62324 171 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 IL13RA2Q14627 380 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 MEF2DQ14814 521 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 MPPED2Q15777 294 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 TATDN3Q17R31 274 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 RNASE10Q5GAN6 216 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 Q5PR19 223 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 ATAD3CQ5T2N8 411 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 BRICD5Q6PL45 260 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 C20orf204Q6ZNR8 217 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 Q71RC1 249 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 OR2Z1Q8NG97 314 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 OR56B4Q8NH76 319 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 SPATA3Q8NHX4 192 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 DYRK2Q92630 601 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 MRGPRFQ96AM1 343 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 FAAP24Q9BTP7 215 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 MRPL37Q9BZE1 423 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 TINAGL1Q9GZM7 467 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 C20orf85Q9H1P6 137 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 ZNF442Q9H7R0 627 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 ZNF701Q9NV72 531 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 TAAR3PQ9P1P4 343 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 ATP23Q9Y6H3 246 aa8.02□□□□□ -1.13
PDLIM5-223ENST00000627587 ARFGEF3Q5TH69 2177 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 IGKV1D-8A0A087WSZ0 117 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 VSTM5A8MXK1 200 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 SIAH2O43255 324 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 AMY2AP04746 511 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 ACAA1P09110 424 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 PGA5P0DJD9 388 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 PMELP40967 661 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 RAG2P55895 527 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 RAB25P57735 213 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 IKZF1Q13422 519 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 RBMS2Q15434 407 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 NKPD1Q17RQ9 610 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 ACTBL2Q562R1 376 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 NCMAPQ5T1S8 102 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 AGAP6Q5VW22 663 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 ADAM5Q6NVV9 412 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 ZNF826PQ6ZT77 177 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 BPIFB2Q8N4F0 458 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 OR51S1Q8NGJ8 323 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 ELMOD3Q96FG2 381 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 CMSS1Q9BQ75 279 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 NRIP2Q9BQI9 281 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 SPACA1Q9HBV2 294 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 RCC2Q9P258 522 aaKnown RBP8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 ZNF230Q9UIE0 474 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 AK3Q9UIJ7 227 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 SCP2D1Q9UJQ7 156 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 FLVCR2Q9UPI3 526 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 DNHD1Q96M86 4753 aa8.01□□□□□ -1.13
PDLIM5-223ENST00000627587 DISC1C4P0D8 188 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 NOS1APO75052 506 aaPredicted RBP8□□□□□ -1.13
PDLIM5-223ENST00000627587 NDUFB6O95139 128 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 NXPH2O95156 264 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 PTBP3O95758 552 aaKnown RBP8□□□□□ -1.13
PDLIM5-223ENST00000627587 H2AFB2P0C5Z0 115 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 DUSP1P28562 367 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 HRH1P35367 487 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 CD200P41217 278 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 PRAMEF6Q5VXH4 476 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 FIP1L1Q6UN15 594 aaKnown RBP8□□□□□ -1.13
PDLIM5-223ENST00000627587 HOGA1Q86XE5 327 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 POC1AQ8NBT0 407 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 BEST4Q8NFU0 473 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 OR4K15Q8NH41 348 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 CHAC2Q8WUX2 184 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 PLPPR2Q96GM1 343 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 Q96MF0 132 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 SLC6A7Q99884 636 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 ST6GALNAC5Q9BVH7 336 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 HES4Q9HCC6 221 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 DSCAMO60469 2012 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 NSD1Q96L73 2696 aaPredicted RBP8□□□□□ -1.13
PDLIM5-223ENST00000627587 hCG_1807616A0A1W2PRN6 198 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 UBE2QL1A1L167 161 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 SHISA9B4DS77 424 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 MCRIP1C9JLW8 97 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 H7C1Q1 480 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 IFNA6P05013 189 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 CSN2P05814 226 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 AMY2BP19961 511 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 DTYMKP23919 212 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 ZNF81P51508 661 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 TAS2R46P59540 309 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 ZMYND11Q15326 602 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 ADIPOQQ15848 244 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 MICBQ29980 383 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 WDR82Q6UXN9 313 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 MAFIPQ8WZ33 124 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 PPP1R14BQ96C90 147 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 CCL19Q99731 98 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 PRRT1Q99946 306 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 GINS4Q9BRT9 223 aa8□□□□□ -1.13
PDLIM5-223ENST00000627587 GSX2Q9BZM3 304 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms