RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 DEFB108AA8MXU0 73 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 SP1P08047 785 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 PPP1CBP62140 327 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 ANKRD55Q3KP44 614 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 TMEM65Q6PI78 240 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 LIAT1Q6ZQX7 453 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 OR2C3Q8N628 320 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 OR10AD1Q8NGE0 317 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 OR10V1Q8NGI7 309 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 GALMQ96C23 342 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 IMMP1LQ96LU5 166 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 GPHA2Q96T91 129 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 SLC26A1Q9H2B4 701 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 DYNLRB1Q9NP97 96 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 MMP26Q9NRE1 261 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 CCL28Q9NRJ3 127 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 POLEQ07864 2286 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 PMS2P1A4D2B8 440 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 DHRS7CA6NNS2 312 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 MPPED1O15442 326 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 SLC25A4P12235 298 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 RCC1P18754 421 aaPredicted RBP11.53□□□□□ -0.56
SIRPA-204ENST00000622179 PMP22Q01453 160 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 IGSF11Q5DX21 431 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 PHYHD1Q5SRE7 291 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 STPG1Q5TH74 334 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 LFNGQ8NES3 379 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 S100PBPQ96BU1 408 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 OR10C1Q96KK4 312 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 PLEKHA3Q9HB20 300 aa11.53□□□□□ -0.56
SIRPA-204ENST00000622179 LIN7CQ9NUP9 197 aaKnown RBP11.53□□□□□ -0.56
SIRPA-204ENST00000622179 LRP5LA4QPB2 252 aa11.52□□□□□ -0.56
SIRPA-204ENST00000622179 SUCLG1P53597 346 aaKnown RBP11.52□□□□□ -0.56
SIRPA-204ENST00000622179 CASP6P55212 293 aa11.52□□□□□ -0.56
SIRPA-204ENST00000622179 ATP1A1-AS1Q5TC04 95 aa11.52□□□□□ -0.56
SIRPA-204ENST00000622179 OR2B8PP59922 312 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 GUK1Q16774 197 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 OR10S1Q8NGN2 331 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 C19orf12Q9NSK7 152 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 TINAGQ9UJW2 476 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 PRELID3BQ9Y3B1 194 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 IGHV3-13P01766 116 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 IGHV3-7P01780 117 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 RPP30P78346 268 aaKnown RBP11.52□□□□□ -0.57
SIRPA-204ENST00000622179 RPL19P84098 196 aaKnown RBP11.52□□□□□ -0.57
SIRPA-204ENST00000622179 NHLRC3Q5JS37 347 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 PRAMEF5Q5TYX0 476 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 PRAMEF6Q5VXH4 476 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 UQCC3Q6UW78 93 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 CLRN3Q8NCR9 226 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 OR2Z1Q8NG97 314 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 RAB9BQ9NP90 201 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 STRAPQ9Y3F4 350 aaKnown RBP11.52□□□□□ -0.57
SIRPA-204ENST00000622179 CELA3AP09093 270 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 DTYMKP23919 212 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 NOVA1P51513 510 aaKnown RBP11.52□□□□□ -0.57
SIRPA-204ENST00000622179 P2RY4P51582 365 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 TMEM50BP56557 158 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 RBM11P57052 281 aaKnown RBP11.52□□□□□ -0.57
SIRPA-204ENST00000622179 TMEM267Q0VDI3 215 aaPredicted RBP11.52□□□□□ -0.57
SIRPA-204ENST00000622179 ZNF345Q14585 488 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 IL34Q6ZMJ4 242 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 SLC25A28Q96A46 364 aa11.52□□□□□ -0.57
SIRPA-204ENST00000622179 TMEM218A2RU14 115 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 NDUFB7P17568 137 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 HOXA1P49639 335 aaPredicted RBP11.51□□□□□ -0.57
SIRPA-204ENST00000622179 NKX6-1P78426 367 aaPredicted RBP11.51□□□□□ -0.57
SIRPA-204ENST00000622179 C1QTNF12Q5T7M4 302 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 MPC1Q9Y5U8 109 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 OR5B21A6NL26 309 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 TRIM77I1YAP6 450 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 AGFG2O95081 481 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 ZNF83P51522 516 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 TAAR3PQ9P1P4 343 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 IGHV3-43A0A0B4J1X8 118 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 NKX2-6A6NCS4 301 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 IGHV3-43DP0DP04 118 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 GPR12P47775 334 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 C10orf128Q5T292 105 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 SLC23A3Q6PIS1 610 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 MDP1Q86V88 176 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 H1FXQ92522 213 aaKnown RBP11.51□□□□□ -0.57
SIRPA-204ENST00000622179 FRZBQ92765 325 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 CACNG5Q9UF02 275 aa11.51□□□□□ -0.57
SIRPA-204ENST00000622179 CLEC18AA5D8T8 446 aa11.5□□□□□ -0.57
SIRPA-204ENST00000622179 MFNGO00587 321 aa11.5□□□□□ -0.57
SIRPA-204ENST00000622179 SPRY3O43610 288 aa11.5□□□□□ -0.57
SIRPA-204ENST00000622179 F12P00748 615 aaPredicted RBP11.5□□□□□ -0.57
SIRPA-204ENST00000622179 MPGP29372 298 aa11.5□□□□□ -0.57
SIRPA-204ENST00000622179 COL19A1Q14993 1142 aa11.5□□□□□ -0.57
SIRPA-204ENST00000622179 HIST2H3PS2Q5TEC6 136 aa11.5□□□□□ -0.57
SIRPA-204ENST00000622179 CLEC18CQ8NCF0 446 aa11.5□□□□□ -0.57
SIRPA-204ENST00000622179 WNT5BQ9H1J7 359 aa11.5□□□□□ -0.57
SIRPA-204ENST00000622179 FOXJ2Q9P0K8 574 aa11.5□□□□□ -0.57
SIRPA-204ENST00000622179 LNP1A1A4G5 178 aa11.5□□□□□ -0.57
SIRPA-204ENST00000622179 RAB19A4D1S5 217 aa11.5□□□□□ -0.57
SIRPA-204ENST00000622179 ACKR3P25106 362 aa11.5□□□□□ -0.57
SIRPA-204ENST00000622179 SNCAP37840 140 aa11.5□□□□□ -0.57
SIRPA-204ENST00000622179 NPBWR2P48146 333 aa11.5□□□□□ -0.57
SIRPA-204ENST00000622179 TMEM211Q6ICI0 200 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms