RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 PTGER4P35408 488 aa18.22■□□□□ 0.51
LIME1-210ENST00000621325 FOXF2Q12947 444 aa18.22■□□□□ 0.51
LIME1-210ENST00000621325 RTP5Q14D33 572 aa18.22■□□□□ 0.51
LIME1-210ENST00000621325 HAGHLQ6PII5 290 aaPredicted RBP18.22■□□□□ 0.51
LIME1-210ENST00000621325 OR5A2Q8NGI9 324 aa18.22■□□□□ 0.51
LIME1-210ENST00000621325 DSPP15924 2871 aaKnown RBP18.22■□□□□ 0.51
LIME1-210ENST00000621325 ANKRD30BLA7E2S9 258 aa18.21■□□□□ 0.51
LIME1-210ENST00000621325 KCNAB3O43448 404 aa18.21■□□□□ 0.51
LIME1-210ENST00000621325 SNAPC5O75971 98 aa18.21■□□□□ 0.51
LIME1-210ENST00000621325 CA6P23280 308 aa18.21■□□□□ 0.51
LIME1-210ENST00000621325 ERVS71-1P61550 626 aa18.21■□□□□ 0.51
LIME1-210ENST00000621325 TBC1D28Q2M2D7 210 aa18.21■□□□□ 0.51
LIME1-210ENST00000621325 GSG1LQ6UXU4 331 aa18.21■□□□□ 0.51
LIME1-210ENST00000621325 HIST1H2AAQ96QV6 131 aa18.21■□□□□ 0.51
LIME1-210ENST00000621325 OPA3Q9H6K4 179 aa18.21■□□□□ 0.51
LIME1-210ENST00000621325 NECAP2Q9NVZ3 263 aa18.21■□□□□ 0.51
LIME1-210ENST00000621325 UBE2NP61088 152 aaKnown RBP18.21■□□□□ 0.51
LIME1-210ENST00000621325 FGF12P61328 243 aa18.21■□□□□ 0.51
LIME1-210ENST00000621325 TGFBR3Q03167 851 aa18.21■□□□□ 0.51
LIME1-210ENST00000621325 SURF2Q15527 256 aaPredicted RBP18.21■□□□□ 0.51
LIME1-210ENST00000621325 BEX5Q5H9J7 111 aa18.21■□□□□ 0.51
LIME1-210ENST00000621325 C5orf24Q7Z6I8 188 aa18.21■□□□□ 0.51
LIME1-210ENST00000621325 TNFSF18Q9UNG2 199 aa18.21■□□□□ 0.51
LIME1-210ENST00000621325 GABRA6Q16445 453 aa18.2■□□□□ 0.5
LIME1-210ENST00000621325 FAM74A1Q5RGS3 127 aa18.2■□□□□ 0.5
LIME1-210ENST00000621325 ELP2Q6IA86 826 aa18.2■□□□□ 0.5
LIME1-210ENST00000621325 Q6ZT83 130 aa18.2■□□□□ 0.5
LIME1-210ENST00000621325 FAM219AQ8IW50 185 aa18.2■□□□□ 0.5
LIME1-210ENST00000621325 ZFP82Q8N141 532 aa18.2■□□□□ 0.5
LIME1-210ENST00000621325 SARAFQ96BY9 339 aa18.2■□□□□ 0.5
LIME1-210ENST00000621325 C14orf166Q9Y224 244 aaKnown RBP18.2■□□□□ 0.5
LIME1-210ENST00000621325 IGHV2-70P01814 119 aa18.2■□□□□ 0.5
LIME1-210ENST00000621325 SLC25A4P12235 298 aa18.2■□□□□ 0.5
LIME1-210ENST00000621325 TMEM200AQ86VY9 491 aa18.2■□□□□ 0.5
LIME1-210ENST00000621325 SAXO1Q8IYX7 474 aa18.2■□□□□ 0.5
LIME1-210ENST00000621325 OR5L1Q8NGL2 311 aa18.2■□□□□ 0.5
LIME1-210ENST00000621325 EXTL1Q92935 676 aa18.2■□□□□ 0.5
LIME1-210ENST00000621325 TOMM40LQ969M1 308 aa18.2■□□□□ 0.5
LIME1-210ENST00000621325 PLSCR2Q9NRY7 297 aa18.2■□□□□ 0.5
LIME1-210ENST00000621325 ESPL1Q14674 2120 aa18.19■□□□□ 0.5
LIME1-210ENST00000621325 RNF222A6NCQ9 220 aa18.19■□□□□ 0.5
LIME1-210ENST00000621325 HSPB6O14558 160 aa18.19■□□□□ 0.5
LIME1-210ENST00000621325 SMPD2O60906 423 aa18.19■□□□□ 0.5
LIME1-210ENST00000621325 CRHP06850 196 aa18.19■□□□□ 0.5
LIME1-210ENST00000621325 NSUN5P2Q63ZY6 315 aa18.19■□□□□ 0.5
LIME1-210ENST00000621325 DHRS11Q6UWP2 260 aa18.19■□□□□ 0.5
LIME1-210ENST00000621325 HSD17B13Q7Z5P4 300 aaPredicted RBP18.19■□□□□ 0.5
LIME1-210ENST00000621325 OR2J1Q9GZK6 312 aa18.19■□□□□ 0.5
LIME1-210ENST00000621325 DNTTIP1Q9H147 329 aa18.19■□□□□ 0.5
LIME1-210ENST00000621325 WDR13Q9H1Z4 485 aa18.19■□□□□ 0.5
LIME1-210ENST00000621325 DECR2Q9NUI1 292 aa18.19■□□□□ 0.5
LIME1-210ENST00000621325 ARID1AO14497 2285 aa18.19■□□□□ 0.5
LIME1-210ENST00000621325 TRAPPC2LH3BP13 241 aa18.19■□□□□ 0.5
LIME1-210ENST00000621325 SPP1P10451 314 aa18.19■□□□□ 0.5
LIME1-210ENST00000621325 ACSF3Q4G176 576 aaPredicted RBP18.19■□□□□ 0.5
LIME1-210ENST00000621325 ZADH2Q8N4Q0 377 aa18.19■□□□□ 0.5
LIME1-210ENST00000621325 CACNA1GO43497 2377 aa18.19■□□□□ 0.5
LIME1-210ENST00000621325 SPDEFO95238 335 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 IFNA4P05014 189 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 SMIM6P0DI80 62 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 CALCRP30988 508 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 FXYD4P59646 89 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 ALKBH6Q3KRA9 238 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 ZNF585AQ6P3V2 769 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 DMRTC2Q8IXT2 367 aaPredicted RBP18.18■□□□□ 0.5
LIME1-210ENST00000621325 OR10C1Q96KK4 312 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 ZNF286AQ9HBT8 521 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 CHMP1AQ9HD42 196 aaPredicted RBP18.18■□□□□ 0.5
LIME1-210ENST00000621325 RAB18Q9NP72 206 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 MPC1Q9Y5U8 109 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 A0A0B4J2A0 478 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 AGFG2O95081 481 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 FCGR2CP31995 323 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 RELQ04864 619 aaPredicted RBP18.18■□□□□ 0.5
LIME1-210ENST00000621325 MKXQ8IYA7 352 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 C17orf78Q8N4C9 275 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 OR6K3Q8NGY3 331 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 WNT2BQ93097 391 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 LRFN3Q9BTN0 628 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 OR51M1Q9H341 326 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 DKK4Q9UBT3 224 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 SHPKQ9UHJ6 478 aa18.18■□□□□ 0.5
LIME1-210ENST00000621325 RHBDL1O75783 438 aa18.17■□□□□ 0.5
LIME1-210ENST00000621325 CTSDP07339 412 aaPredicted RBP18.17■□□□□ 0.5
LIME1-210ENST00000621325 RD3LP0DJH9 198 aa18.17■□□□□ 0.5
LIME1-210ENST00000621325 PPP1CBP62140 327 aa18.17■□□□□ 0.5
LIME1-210ENST00000621325 GNG3P63215 75 aa18.17■□□□□ 0.5
LIME1-210ENST00000621325 TMEM211Q6ICI0 200 aa18.17■□□□□ 0.5
LIME1-210ENST00000621325 VRK1Q99986 396 aaPredicted RBP18.17■□□□□ 0.5
LIME1-210ENST00000621325 CDH20Q9HBT6 801 aa18.17■□□□□ 0.5
LIME1-210ENST00000621325 INTS1Q8N201 2190 aaKnown RBP18.17■□□□□ 0.5
LIME1-210ENST00000621325 K7EM74 188 aa18.17■□□□□ 0.5
LIME1-210ENST00000621325 HOXB5P09067 269 aa18.17■□□□□ 0.5
LIME1-210ENST00000621325 PSMB6P28072 239 aa18.17■□□□□ 0.5
LIME1-210ENST00000621325 KCNRGQ8N5I3 272 aa18.17■□□□□ 0.5
LIME1-210ENST00000621325 OR1S1Q8NH92 325 aa18.17■□□□□ 0.5
LIME1-210ENST00000621325 THAP6Q8TBB0 222 aa18.17■□□□□ 0.5
LIME1-210ENST00000621325 NMES1Q9C002 83 aa18.17■□□□□ 0.5
LIME1-210ENST00000621325 METTL8Q9H825 291 aaKnown RBP18.17■□□□□ 0.5
LIME1-210ENST00000621325 KLK10O43240 276 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms