RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 RSU1Q15404 277 aa18.33■□□□□ 0.52
SGMS1-210ENST00000619438 PCDHB16Q9NRJ7 776 aa18.33■□□□□ 0.52
SGMS1-210ENST00000619438 MAB21L2Q9Y586 359 aa18.33■□□□□ 0.52
SGMS1-210ENST00000619438 ATP23Q9Y6H3 246 aa18.33■□□□□ 0.52
SGMS1-210ENST00000619438 RTTNQ86VV8 2226 aa18.33■□□□□ 0.52
SGMS1-210ENST00000619438 CADP27708 2225 aa18.32■□□□□ 0.52
SGMS1-210ENST00000619438 LOC100509620A0A075B734 347 aa18.32■□□□□ 0.52
SGMS1-210ENST00000619438 CSTBP04080 98 aaKnown RBP18.32■□□□□ 0.52
SGMS1-210ENST00000619438 CD79AP11912 226 aa18.32■□□□□ 0.52
SGMS1-210ENST00000619438 RPA2P15927 270 aa18.32■□□□□ 0.52
SGMS1-210ENST00000619438 FPR2P25090 351 aa18.32■□□□□ 0.52
SGMS1-210ENST00000619438 S100A11P31949 105 aa18.32■□□□□ 0.52
SGMS1-210ENST00000619438 SNU13P55769 128 aaKnown RBP18.32■□□□□ 0.52
SGMS1-210ENST00000619438 NKX6-1P78426 367 aaPredicted RBP18.32■□□□□ 0.52
SGMS1-210ENST00000619438 EXOSC2Q13868 293 aaKnown RBP18.32■□□□□ 0.52
SGMS1-210ENST00000619438 CLLU1Q5K131 121 aa18.32■□□□□ 0.52
SGMS1-210ENST00000619438 TMEM65Q6PI78 240 aa18.32■□□□□ 0.52
SGMS1-210ENST00000619438 OR5AP2Q8NGF4 316 aa18.32■□□□□ 0.52
SGMS1-210ENST00000619438 MARCH1Q8TCQ1 289 aa18.32■□□□□ 0.52
SGMS1-210ENST00000619438 AUP1Q9Y679 476 aa18.32■□□□□ 0.52
SGMS1-210ENST00000619438 MED13LQ71F56 2210 aa18.32■□□□□ 0.52
SGMS1-210ENST00000619438 CRYAAP02489 173 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 OR3A3P47888 321 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 TMEM128Q5BJH2 165 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 C6orf183Q5T699 404 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 ZSCAN4Q8NAM6 433 aaPredicted RBP18.31■□□□□ 0.52
SGMS1-210ENST00000619438 PERPQ96FX8 193 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 REPIN1Q9BWE0 567 aaKnown RBP18.31■□□□□ 0.52
SGMS1-210ENST00000619438 ZNF469Q96JG9 3925 aaPredicted RBP18.31■□□□□ 0.52
SGMS1-210ENST00000619438 DSCAMO60469 2012 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 A0A0B4J2A0 478 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 IGHV1-18A0A0C4DH31 117 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 NOS1APO75052 506 aaPredicted RBP18.31■□□□□ 0.52
SGMS1-210ENST00000619438 HTR3BO95264 441 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 CBR1P16152 277 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 PDZK1IP1Q13113 114 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 SURF2Q15527 256 aaPredicted RBP18.31■□□□□ 0.52
SGMS1-210ENST00000619438 OVCH2Q7RTZ1 564 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 ADAD2Q8NCV1 583 aaKnown RBP18.31■□□□□ 0.52
SGMS1-210ENST00000619438 CSNK2A3Q8NEV1 391 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 NANOS1Q8WY41 292 aaKnown RBP18.31■□□□□ 0.52
SGMS1-210ENST00000619438 EMG1Q92979 244 aaKnown RBP18.31■□□□□ 0.52
SGMS1-210ENST00000619438 ST6GALNAC5Q9BVH7 336 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 OPA3Q9H6K4 179 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 PLEKHJ1Q9NW61 149 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 SHPKQ9UHJ6 478 aa18.31■□□□□ 0.52
SGMS1-210ENST00000619438 RAI1Q7Z5J4 1906 aaPredicted RBP18.3■□□□□ 0.52
SGMS1-210ENST00000619438 TRAV14DV4A0A0A6YYC5 116 aa18.3■□□□□ 0.52
SGMS1-210ENST00000619438 DBX1A6NMT0 343 aa18.3■□□□□ 0.52
SGMS1-210ENST00000619438 HLA-HP01893 362 aa18.3■□□□□ 0.52
SGMS1-210ENST00000619438 SERPINA5P05154 406 aa18.3■□□□□ 0.52
SGMS1-210ENST00000619438 SOD3P08294 240 aa18.3■□□□□ 0.52
SGMS1-210ENST00000619438 SLC25A4P12235 298 aa18.3■□□□□ 0.52
SGMS1-210ENST00000619438 ECI1P42126 302 aa18.3■□□□□ 0.52
SGMS1-210ENST00000619438 SIGIRRQ6IA17 410 aa18.3■□□□□ 0.52
SGMS1-210ENST00000619438 MOB3CQ70IA8 216 aa18.3■□□□□ 0.52
SGMS1-210ENST00000619438 TMUB2Q71RG4 321 aa18.3■□□□□ 0.52
SGMS1-210ENST00000619438 OR13G1Q8NGZ3 307 aa18.3■□□□□ 0.52
SGMS1-210ENST00000619438 APOBEC3DQ96AK3 386 aaPredicted RBP18.3■□□□□ 0.52
SGMS1-210ENST00000619438 PPA2Q9H2U2 334 aa18.3■□□□□ 0.52
SGMS1-210ENST00000619438 FXYD6-FXYD2A0A087WZ82 144 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 RPS10-NUDT3A0A1W2PQS6 291 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 E7EQL1 145 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 ARPC5O15511 151 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 SPRY1O43609 319 aaPredicted RBP18.29■□□□□ 0.52
SGMS1-210ENST00000619438 ANGPTL7O43827 346 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 DANCRP0C864 163 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 DTYMKP23919 212 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 GABRR1P24046 479 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 FABP6P51161 128 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 IDH3GP51553 393 aaPredicted RBP18.29■□□□□ 0.52
SGMS1-210ENST00000619438 HLXQ14774 488 aaPredicted RBP18.29■□□□□ 0.52
SGMS1-210ENST00000619438 AADACL3Q5VUY0 350 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 PLCXD3Q63HM9 321 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 C6orf201Q7Z4U5 140 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 MDP1Q86V88 176 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 OR8H3Q8N146 312 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 LRRC75A-AS1Q8N1F1 130 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 FAM169BQ8N8A8 192 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 Q8NFD4 153 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 FXYD6Q9H0Q3 95 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 C5orf66Q9H5L9 145 aa18.29■□□□□ 0.52
SGMS1-210ENST00000619438 OR5H14A6NHG9 310 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 ATP6V1G2-DDX39BF2Z307 99 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 CFDP00746 253 aaPredicted RBP18.28■□□□□ 0.52
SGMS1-210ENST00000619438 CHATP28329 748 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 PMELP40967 661 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 SHEQ5VZ18 495 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 FBXL14Q8N1E6 418 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 OSR2Q8N2R0 312 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 PIGCQ92535 297 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 DHRS9Q9BPW9 319 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 HEATR1Q9H583 2144 aaKnown RBP18.28■□□□□ 0.52
SGMS1-210ENST00000619438 IGKV1-12A0A0C4DH73 117 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 CST4P01036 141 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 IGKV1D-12P01611 117 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 IGKV3-15P01624 115 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 CECR9P0C854 216 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 AKR1C4P17516 323 aa18.28■□□□□ 0.52
SGMS1-210ENST00000619438 RAB1AP62820 205 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms