RNA–Protein interactions for RNA: ENST00000618934.1

PCDHGB3-202, Transcript of protocadherin gamma subfamily B, 3, humanhuman

APPRIS P1 BASIC

Gene PCDHGB3, Length 2,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-202ENST00000618934 HAAOP46952 286 aa16.55■□□□□ 0.24
PCDHGB3-202ENST00000618934 F2RL1P55085 397 aa16.55■□□□□ 0.24
PCDHGB3-202ENST00000618934 PRDX4Q13162 271 aa16.55■□□□□ 0.24
PCDHGB3-202ENST00000618934 LGI3Q8N145 548 aa16.55■□□□□ 0.24
PCDHGB3-202ENST00000618934 OR2M7Q8NG81 312 aa16.55■□□□□ 0.24
PCDHGB3-202ENST00000618934 KIRREL1Q96J84 757 aa16.55■□□□□ 0.24
PCDHGB3-202ENST00000618934 PLA2G3Q9NZ20 509 aa16.55■□□□□ 0.24
PCDHGB3-202ENST00000618934 ESPL1Q14674 2120 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 NKX2-6A6NCS4 301 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 UCP3P55916 312 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 CLDN18P56856 261 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 HERV-K104P61576 105 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 IGFBP7Q16270 282 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 AKIRIN2Q53H80 203 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 RAB11FIP2Q7L804 512 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 TMEM45BQ96B21 275 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 GUCD1Q96NT3 240 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 SCRT1Q9BWW7 348 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 FOXJ2Q9P0K8 574 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 MLXQ9UH92 298 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 MEX3AA1L020 520 aaKnown RBP16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 C9orf172C9J069 976 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 MPPED1O15442 326 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 GPR137BO60478 399 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 RPL35P42766 123 aaKnown RBP16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 GLP1RP43220 463 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 TSC22D1Q15714 1073 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 C3AR1Q16581 482 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 MIDNQ504T8 468 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 SUMF1Q8NBK3 374 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 ZNF703Q9H7S9 590 aaPredicted RBP16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 MTCH1Q9NZJ7 389 aa16.54■□□□□ 0.24
PCDHGB3-202ENST00000618934 IGKV3D-15A0A087WSY6 115 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 C3orf85A0A1B0GTC6 90 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 RPL36A-HNRNPH2H7BZ11 118 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 MAGEA5P43359 124 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 HERPUD1Q15011 391 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 OR4D5Q8NGN0 318 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 RXFP4Q8TDU9 374 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 SYT3Q9BQG1 590 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 SPRY4Q9C004 299 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 LOC400499M0QZD8 3231 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 IGKV1D-13A0A0B4J2D9 117 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 LILRA1O75019 489 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 GLAP06280 429 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 IGKV1-13P0DP09 117 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 AKR1D1P51857 326 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 DVL1P1P54792 670 aaPredicted RBP16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 SWI5Q1ZZU3 235 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 FAM76BQ5HYJ3 339 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 HSD17B11Q8NBQ5 300 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 ZFP57Q9NU63 452 aa16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 BOKQ9UMX3 212 aaPredicted RBP16.53■□□□□ 0.24
PCDHGB3-202ENST00000618934 ST8SIA3O43173 380 aa16.52■□□□□ 0.24
PCDHGB3-202ENST00000618934 CRYBA1P05813 215 aa16.52■□□□□ 0.24
PCDHGB3-202ENST00000618934 DANCRP0C864 163 aa16.52■□□□□ 0.24
PCDHGB3-202ENST00000618934 ZNF616Q08AN1 781 aa16.52■□□□□ 0.24
PCDHGB3-202ENST00000618934 Q8NFD4 153 aa16.52■□□□□ 0.24
PCDHGB3-202ENST00000618934 ZNF488Q96MN9 340 aa16.52■□□□□ 0.24
PCDHGB3-202ENST00000618934 GINS3Q9BRX5 216 aa16.52■□□□□ 0.24
PCDHGB3-202ENST00000618934 ZNF552Q9H707 407 aaPredicted RBP16.52■□□□□ 0.24
PCDHGB3-202ENST00000618934 SPP1P10451 314 aa16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 KCNJ3P48549 501 aa16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 PPT1P50897 306 aa16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 ZNF818PQ6ZRF7 136 aa16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 TBC1D26Q86UD7 250 aa16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 Q9N2K0 584 aa16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 FAM212BQ9NTI7 297 aaPredicted RBP16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 CACFD1Q9UGQ2 172 aa16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 IGKV1-6A0A0C4DH72 117 aa16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 A0A1B0GV50 99 aa16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 FAM24AA6NFZ4 105 aa16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 ZNF98A6NK75 572 aa16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 ZNF732B4DXR9 585 aa16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 SYNGR1O43759 233 aa16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 SNCAP37840 140 aa16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 P2RY1P47900 373 aa16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 ZFP82Q8N141 532 aa16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 ESRP2Q9H6T0 727 aaKnown RBP16.51■□□□□ 0.23
PCDHGB3-202ENST00000618934 SLC33A1O00400 549 aaPredicted RBP16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 TSPAN15O95858 294 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 POLR2GP62487 172 aaKnown RBP eCLIP16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 SPIN3Q5JUX0 258 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 C20orf204Q6ZNR8 217 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 LINC00696Q6ZRV3 163 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 TECTBQ96PL2 329 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 FAM173AQ9BQD7 235 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 TMEM222Q9H0R3 208 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 MAGT1Q9H0U3 335 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 C11orf1Q9H5F2 150 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 PLSCR2Q9NRY7 297 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 R4GN57 208 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 NAPSAO96009 420 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 CTAG1AP78358 180 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 IL13RA2Q14627 380 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 GPR157Q5UAW9 335 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 DPPA2Q7Z7J5 298 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 GAPTQ8N292 157 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 CCDC71LQ8N9Z2 235 aa16.5■□□□□ 0.23
PCDHGB3-202ENST00000618934 C2CD4CQ8TF44 421 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms