RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 A0A0U1RQK1 487 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 VWC2LB2RUY7 222 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 CCRL2O00421 344 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 SH2D1BO14796 132 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 BET1O15155 118 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 SOCS1O15524 211 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 AIREO43918 545 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 TK1P04183 234 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 PGA5P0DJD9 388 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 GTF2F2P13984 249 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 DVL1P1P54792 670 aaPredicted RBP3.8□□□□□ -1.8
SYCP1-210ENST00000618516 GP2P55259 537 aaKnown RBP3.8□□□□□ -1.8
SYCP1-210ENST00000618516 LINC00205P59089 165 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 YIF1BQ5BJH7 314 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 KHDC1LQ5JSQ8 128 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 RAB12Q6IQ22 244 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 FIP1L1Q6UN15 594 aaKnown RBP3.8□□□□□ -1.8
SYCP1-210ENST00000618516 LHFPL2Q6ZUX7 228 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 RHOUQ7L0Q8 258 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 CLVS1Q8IUQ0 354 aaPredicted RBP3.8□□□□□ -1.8
SYCP1-210ENST00000618516 NANPQ8TBE9 248 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 PHF21AQ96BD5 680 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 POM121Q96HA1 1249 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 NRIP2Q9BQI9 281 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 TMEM59Q9BXS4 323 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 ATG5Q9H1Y0 275 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 LIN7BQ9HAP6 207 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 INPP5EQ9NRR6 644 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 GNG12Q9UBI6 72 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 SSR3Q9UNL2 185 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 SIGLEC9Q9Y336 463 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 NOP16Q9Y3C1 178 aaKnown RBP3.8□□□□□ -1.8
SYCP1-210ENST00000618516 HSPE1-MOB4S4R3N1 261 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 A0A096LNT2 108 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 HOXA3O43365 443 aaPredicted RBP3.8□□□□□ -1.8
SYCP1-210ENST00000618516 DENRO43583 198 aaKnown RBP3.8□□□□□ -1.8
SYCP1-210ENST00000618516 CD5LO43866 347 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 TNFAIP8O95379 198 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 ARG1P05089 322 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 APELAP0DMC3 54 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 RPA2P15927 270 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 GNB3P16520 340 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 CCR9P51686 369 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 TAS2R43P59537 309 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 MRPS15P82914 257 aaKnown RBP3.8□□□□□ -1.8
SYCP1-210ENST00000618516 DEFB112Q30KQ8 113 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 MOGAT2Q3SYC2 334 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 SLC25A30Q5SVS4 291 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 TMEM200BQ69YZ2 307 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 ZNF773Q6PK81 442 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 LINC00299Q6ZSB3 139 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 SNX29P2Q8IUI4 249 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 CROCCP3Q8IVE0 287 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 OSR2Q8N2R0 312 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 SVOPQ8N4V2 548 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 ARL11Q969Q4 196 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 NEDD4LQ96PU5 975 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 ST6GALNAC5Q9BVH7 336 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 TMPRSS13Q9BYE2 586 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 NBEAL2Q6ZNJ1 2754 aa3.8□□□□□ -1.8
SYCP1-210ENST00000618516 DPPA5A6NC42 116 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 J3QW42 95 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 RAB27BO00194 218 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 ENSAO43768 121 aaKnown RBP3.79□□□□□ -1.8
SYCP1-210ENST00000618516 GOSR1O95249 250 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 IGHV4-59P01825 116 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 MUC1P15941 1255 aaPredicted RBP3.79□□□□□ -1.8
SYCP1-210ENST00000618516 RAB3BP20337 219 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 SAA4P35542 130 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 OR3A1P47881 315 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 DIAPH2-AS1Q14236 149 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 KCNJ8Q15842 424 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 OR2B11Q5JQS5 317 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 SYT6Q5T7P8 510 aaPredicted RBP3.79□□□□□ -1.8
SYCP1-210ENST00000618516 GLT8D1Q68CQ7 371 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 STUMQ69YW2 141 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 C17orf107Q6ZR85 190 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 LRRTM1Q86UE6 522 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 NR2C2APQ86WQ0 139 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 PARP16Q8N5Y8 322 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 SUMF2Q8NBJ7 301 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 OR13A1Q8NGR1 328 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 PLPPR1Q8TBJ4 325 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 CASTOR1Q8WTX7 329 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 NUDCD2Q8WVJ2 157 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 SPSB1Q96BD6 273 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 WDFY2Q96P53 400 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 TXNL4BQ9NX01 149 aaKnown RBP3.79□□□□□ -1.8
SYCP1-210ENST00000618516 SLC23A1Q9UHI7 598 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 CDC42EP3Q9UKI2 254 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 A3GALT2U3KPV4 340 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 FAM181BA6NEQ2 426 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 TMEM235A6NFC5 223 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 TMEM210A6NLX4 147 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 OGG1O15527 345 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 WIPF1O43516 503 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 CRLF1O75462 422 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 LIPFP07098 398 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 CD55P08174 381 aa3.79□□□□□ -1.8
SYCP1-210ENST00000618516 VSIG8P0DPA2 414 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms