RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 RBM11P57052 281 aaKnown RBP12.32□□□□□ -0.44
UBXN1-218ENST00000616865 IKZF1Q13422 519 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 FAM189A2Q15884 450 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 TMEM155Q4W5P6 130 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 OR10K2Q6IF99 312 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 MZT2AQ6P582 158 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 RBMS3Q6XE24 437 aaKnown RBP12.32□□□□□ -0.44
UBXN1-218ENST00000616865 DCDC5Q6ZRR9 648 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 NLRC3Q7RTR2 1065 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 SLC36A1Q7Z2H8 476 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 SIGLECL1Q8N7X8 197 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 OR51T1Q8NGJ9 327 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 KCNK15Q9H427 330 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 ZMAT3Q9HA38 289 aaKnown RBP12.32□□□□□ -0.44
UBXN1-218ENST00000616865 ABRACLQ9P1F3 81 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 MIOXQ9UGB7 285 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 RAB22AQ9UL26 194 aa12.32□□□□□ -0.44
UBXN1-218ENST00000616865 A0A1W2PP11 408 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 DNAJC9-AS1A6NH13 148 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 DEGS1O15121 323 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 HAND1O96004 215 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 ZNF44P15621 663 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 ZNF182P17025 639 aaPredicted RBP12.31□□□□□ -0.44
UBXN1-218ENST00000616865 GABRR1P24046 479 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 PRTN3P24158 256 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 ZFP36P26651 326 aaKnown RBP12.31□□□□□ -0.44
UBXN1-218ENST00000616865 IL13RA2Q14627 380 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 PIGYQ3MUY2 71 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 STUMQ69YW2 141 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 LINC00596Q86U02 117 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 OR8B3Q8NGG8 313 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 LGALS14Q8TCE9 139 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 ACOT12Q8WYK0 555 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 PHF21AQ96BD5 680 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 KCTD12Q96CX2 325 aaKnown RBP12.31□□□□□ -0.44
UBXN1-218ENST00000616865 MED30Q96HR3 178 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 OR8B2Q96RD0 313 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 CCL13Q99616 98 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 IL36RNQ9UBH0 155 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 ETV7Q9Y603 341 aa12.31□□□□□ -0.44
UBXN1-218ENST00000616865 TMEM272A0A1B0GTI8 110 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 METTL21EPA6NDL7 271 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 CEACAM18A8MTB9 384 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 TMEM14DPA8MWL7 114 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 H3BUI4 141 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 SIRPB1O00241 398 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 OR7C1O76099 320 aaPredicted RBP12.3□□□□□ -0.44
UBXN1-218ENST00000616865 PAHP00439 452 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 CHRM2P08172 466 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 CPT2P23786 658 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 CEBPDP49716 269 aaPredicted RBP12.3□□□□□ -0.44
UBXN1-218ENST00000616865 SCAND1P57086 179 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 IL13RA1P78552 427 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 ZNF146Q15072 292 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 ASCC1Q8N9N2 400 aaKnown RBP12.3□□□□□ -0.44
UBXN1-218ENST00000616865 TMEM104Q8NE00 496 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 Q8NFD4 153 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 ANGPTL6Q8NI99 470 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 DYNC2LI1Q8TCX1 351 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 NEIL1Q96FI4 390 aaPredicted RBP12.3□□□□□ -0.44
UBXN1-218ENST00000616865 C1orf147Q96MC9 270 aaPredicted RBP12.3□□□□□ -0.44
UBXN1-218ENST00000616865 DUX5Q96PT3 197 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 DCUN1D5Q9BTE7 237 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 BARHL1Q9BZE3 327 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 DNTTIP1Q9H147 329 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 MMP26Q9NRE1 261 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 CCDC59Q9P031 241 aaKnown RBP12.3□□□□□ -0.44
UBXN1-218ENST00000616865 ZNF69Q9UC07 566 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 OR5V1Q9UGF6 321 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 NUP50Q9UKX7 468 aa12.3□□□□□ -0.44
UBXN1-218ENST00000616865 IGKV1D-17A0A075B6S4 117 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 A6NHS1 94 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 GEMIN2O14893 280 aaKnown RBP12.29□□□□□ -0.44
UBXN1-218ENST00000616865 NDUFB3O43676 98 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 TFF1P04155 84 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 RAB6AP20340 208 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 RPS27AP62979 156 aaKnown RBP12.29□□□□□ -0.44
UBXN1-218ENST00000616865 COL10A1Q03692 680 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 UNC119Q13432 240 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 PDCD1Q15116 288 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 TAF9Q16594 264 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 MPV17LQ2QL34 196 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 LRRC10Q5BKY1 277 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 NHLRC3Q5JS37 347 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 KLF17Q5JT82 389 aaPredicted RBP12.29□□□□□ -0.44
UBXN1-218ENST00000616865 ATAD3CQ5T2N8 411 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 LYPD2Q6UXB3 125 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 ZNF561Q8N587 486 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 CHST4Q8NCG5 386 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 TMEM185AQ8NFB2 350 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 PPP1R35Q8TAP8 253 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 ZNF48Q96MX3 618 aaPredicted RBP12.29□□□□□ -0.44
UBXN1-218ENST00000616865 NEDD4LQ96PU5 975 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 ATG5Q9H1Y0 275 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 UNKLQ9H9P5 680 aaKnown RBP12.29□□□□□ -0.44
UBXN1-218ENST00000616865 PATZ1Q9HBE1 687 aaKnown RBP12.29□□□□□ -0.44
UBXN1-218ENST00000616865 COMMD3Q9UBI1 195 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 FBLN5Q9UBX5 448 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 SPATA2Q9UM82 520 aa12.29□□□□□ -0.44
UBXN1-218ENST00000616865 POLR3KQ9Y2Y1 108 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms