RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 STRCQ7RTU9 1775 aa6.1□□□□□ -1.43
CLCN3-211ENST00000613795 TMEM202A6NGA9 273 aa6.1□□□□□ -1.43
CLCN3-211ENST00000613795 RAE1P78406 368 aaKnown RBP6.1□□□□□ -1.43
CLCN3-211ENST00000613795 ERHP84090 104 aaKnown RBP6.1□□□□□ -1.43
CLCN3-211ENST00000613795 SERF2P84101 59 aa6.1□□□□□ -1.43
CLCN3-211ENST00000613795 DNLZQ5SXM8 178 aa6.1□□□□□ -1.43
CLCN3-211ENST00000613795 OR1N1Q8NGS0 311 aa6.1□□□□□ -1.43
CLCN3-211ENST00000613795 SDHCQ99643 169 aaPredicted RBP6.1□□□□□ -1.43
CLCN3-211ENST00000613795 LPAR5Q9H1C0 372 aa6.1□□□□□ -1.43
CLCN3-211ENST00000613795 A0A087WWC5 75 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 TRBV9A0A0B4J1U6 114 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 MED19A0JLT2 244 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-211ENST00000613795 NPIPB8E9PQR5 432 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 CORTO00230 105 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 CD8AP01732 235 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 CRYAAP02489 173 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 ANKRD34CP0C6C1 535 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 ATP6V0CP27449 155 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 G6PCP35575 357 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 APOBEC3DQ96AK3 386 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-211ENST00000613795 SPACA5Q96QH8 159 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 PIAS2O75928 621 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 IER3P46695 156 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 GZMMP51124 257 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 SIGLEC14Q08ET2 396 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 PRTGQ2VWP7 1150 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 LHX8Q68G74 356 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 C17orf78Q8N4C9 275 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 OR8G5Q8NG78 346 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 BCL2L2Q92843 193 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-211ENST00000613795 MIEN1Q9BRT3 115 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 MENTQ9BUN1 341 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 SLC26A1Q9H2B4 701 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 VCX2Q9H322 139 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 VSIG4Q9Y279 399 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 HELTA6NFD8 242 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 DNPH1O43598 174 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 SMAD2Q15796 467 aaKnown RBP6.09□□□□□ -1.43
CLCN3-211ENST00000613795 SMIM21Q3B7S5 101 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 ABHD14BQ96IU4 210 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 GPX7Q96SL4 187 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-211ENST00000613795 GINS3Q9BRX5 216 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 FAM234AQ9H0X4 552 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 OCIAD1Q9NX40 245 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 HS3ST1O14792 307 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 STAG3L3P0CL85 134 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 DEFA4P12838 97 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 CTAG1AP78358 180 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 ERASQ7Z444 233 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 OR52L2PQ8NGH6 319 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 H1FXQ92522 213 aaKnown RBP6.09□□□□□ -1.43
CLCN3-211ENST00000613795 SPACA9Q96E40 222 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-211ENST00000613795 UCN2Q96RP3 112 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 COA4Q9NYJ1 87 aa6.09□□□□□ -1.43
CLCN3-211ENST00000613795 CISD1Q9NZ45 108 aaKnown RBP6.09□□□□□ -1.43
CLCN3-211ENST00000613795 OR2M5A3KFT3 312 aa6.09□□□□□ -1.44
CLCN3-211ENST00000613795 SLC25A17O43808 307 aa6.09□□□□□ -1.44
CLCN3-211ENST00000613795 SPINK4O60575 86 aa6.09□□□□□ -1.44
CLCN3-211ENST00000613795 VDAC1P21796 283 aa6.09□□□□□ -1.44
CLCN3-211ENST00000613795 ZNF121P58317 390 aaPredicted RBP6.09□□□□□ -1.44
CLCN3-211ENST00000613795 NUTF2P61970 127 aaKnown RBP6.09□□□□□ -1.44
CLCN3-211ENST00000613795 PPP1CAP62136 330 aa6.09□□□□□ -1.44
CLCN3-211ENST00000613795 OR10G3Q8NGC4 313 aa6.09□□□□□ -1.44
CLCN3-211ENST00000613795 C16orf52Q8NHV5 167 aa6.09□□□□□ -1.44
CLCN3-211ENST00000613795 CLDN23Q96B33 292 aa6.09□□□□□ -1.44
CLCN3-211ENST00000613795 C2orf88Q9BSF0 95 aa6.09□□□□□ -1.44
CLCN3-211ENST00000613795 OR2J1Q9GZK6 312 aa6.09□□□□□ -1.44
CLCN3-211ENST00000613795 KCNK15Q9H427 330 aa6.09□□□□□ -1.44
CLCN3-211ENST00000613795 MTCH2Q9Y6C9 303 aa6.09□□□□□ -1.44
CLCN3-211ENST00000613795 TMEM238LA0A1B0GVL6 79 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 A6NJY4 79 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 K7ESM1 405 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 RER1O15258 196 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 NEURL1O76050 574 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 SOD3P08294 240 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 RCC1P18754 421 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-211ENST00000613795 NPBWR2P48146 333 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 ZNF770Q6IQ21 691 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-211ENST00000613795 KIRREL2Q6UWL6 708 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 C6orf201Q7Z4U5 140 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 OR4C12Q96R67 309 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 SLX1AQ9BQ83 275 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 SH2D2AQ9NP31 389 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 ZNF835Q9Y2P0 537 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 ATP23Q9Y6H3 246 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 TRAV17A0A0B4J275 112 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 GALR2O43603 387 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-211ENST00000613795 NKX2-2O95096 273 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 HLA-DQA1P01909 254 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 HIST1H1EP10412 219 aaKnown RBP6.08□□□□□ -1.44
CLCN3-211ENST00000613795 ZBTB25P24278 435 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 EFNB1P98172 346 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 LTC4SQ16873 150 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 ISXQ2M1V0 245 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 GVQW1Q8N7I0 195 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 GPBAR1Q8TDU6 330 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 C10orf35Q96D05 121 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 CNTD2Q9H8S5 307 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 SLC7A10Q9NS82 523 aa6.08□□□□□ -1.44
CLCN3-211ENST00000613795 FAM206AQ9NX38 181 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms