RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 AJAP1Q9UKB5 411 aaPredicted RBP4.81□□□□□ -1.64
CCL16-206ENST00000613642 FUT9Q9Y231 359 aa4.81□□□□□ -1.64
CCL16-206ENST00000613642 NTNG1Q9Y2I2 539 aa4.81□□□□□ -1.64
CCL16-206ENST00000613642 NRXN3Q9Y4C0 1643 aa4.81□□□□□ -1.64
CCL16-206ENST00000613642 PLCH1Q4KWH8 1693 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 LOXHD1Q8IVV2 1947 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 PLXND1Q9Y4D7 1925 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 CACNA1SQ13698 1873 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 ANKRD31Q8N7Z5 1873 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 TINCRA0A1B0GVN0 87 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 SMIM35A0A1B0GVV1 85 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 SHISA3A0PJX4 238 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 MEIS3P1A6NDR6 274 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 TMEM8BA6NDV4 472 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 MANSC4A6NHS7 340 aaPredicted RBP4.8□□□□□ -1.64
CCL16-206ENST00000613642 H7C1C5 153 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 F2RL2O00254 374 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 SAP18O00422 153 aaKnown RBP4.8□□□□□ -1.64
CCL16-206ENST00000613642 PIRO00625 290 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 XRCC3O43542 346 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 CD5LO43866 347 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 FCGR3BO75015 233 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 EEDO75530 441 aaKnown RBP4.8□□□□□ -1.64
CCL16-206ENST00000613642 MOSP00540 346 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 CD8AP01732 235 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 HLA-DOAP06340 250 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 KLK1P06870 262 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 CELA2AP08217 269 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 FCGR3AP08637 254 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 CT45A6P0DMU7 189 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 CT45A5P0DMU8 189 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 CT45A10P0DMU9 189 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 CT45A7P0DMV0 189 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 CYBAP13498 195 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 MMP9P14780 707 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 MALP21145 153 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 FCARP24071 287 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 SRIP30626 198 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 HRH1P35367 487 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 GDF5P43026 501 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 P2RY1P47900 373 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 RND2P52198 227 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 ZNF133P52736 654 aaPredicted RBP4.8□□□□□ -1.64
CCL16-206ENST00000613642 EFNA5P52803 228 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 MANFP55145 182 aaKnown RBP4.8□□□□□ -1.64
CCL16-206ENST00000613642 SLC6A3Q01959 620 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 ROM1Q03395 351 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 ACSM2AQ08AH3 577 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 EXOSC7Q15024 291 aaKnown RBP4.8□□□□□ -1.64
CCL16-206ENST00000613642 CDKN3Q16667 212 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 TBC1D28Q2M2D7 210 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 VWC2Q2TAL6 325 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 DCAF4L1Q3SXM0 396 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 ALG10Q5BKT4 473 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 VWA2Q5GFL6 755 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 CT45A1Q5HYN5 189 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 KHDC1LQ5JSQ8 128 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 LYPLAL1Q5VWZ2 237 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 LYSMD4Q5XG99 296 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 ACSM2BQ68CK6 577 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 PLAG1Q6DJT9 500 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 UFSP1Q6NVU6 142 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 AADACL2Q6P093 401 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 C12orf54Q6X4T0 127 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 TGIF2LYQ8IUE0 185 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 ZNF547Q8IVP9 402 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 OSR2Q8N2R0 312 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 RNF175Q8N4F7 328 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 TTC9CQ8N5M4 171 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 DEFB125Q8N687 156 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 SUMF2Q8NBJ7 301 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.8□□□□□ -1.64
CCL16-206ENST00000613642 OR10Q1Q8NGQ4 319 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 CT45A3Q8NHU0 189 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 FAM110DQ8TAY7 271 aaPredicted RBP4.8□□□□□ -1.64
CCL16-206ENST00000613642 SARAFQ96BY9 339 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 PPCDCQ96CD2 204 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 EAF2Q96CJ1 260 aaPredicted RBP4.8□□□□□ -1.64
CCL16-206ENST00000613642 C10orf35Q96D05 121 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 SGK494Q96LW2 274 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 IP6K3Q96PC2 410 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 NRTNQ99748 197 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 ATF6BQ99941 703 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 LRRC61Q9BV99 259 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 IFI27L2Q9H2X8 130 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 TCEAL2Q9H3H9 227 aaPredicted RBP4.8□□□□□ -1.64
CCL16-206ENST00000613642 SIX2Q9NPC8 291 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 ACP6Q9NPH0 428 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 NDUFB11Q9NX14 153 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 FAM206AQ9NX38 181 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 COMMD9Q9P000 198 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 PRO0628Q9UI54 55 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 KCNS2Q9ULS6 477 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 ASF1AQ9Y294 204 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 PXDNQ92626 1479 aa4.8□□□□□ -1.64
CCL16-206ENST00000613642 LAMA4Q16363 1823 aa4.79□□□□□ -1.64
CCL16-206ENST00000613642 ZNF816-ZNF321PA0A0X1KG74 233 aa4.79□□□□□ -1.64
CCL16-206ENST00000613642 SPAARA0A1B0GVQ0 90 aa4.79□□□□□ -1.64
CCL16-206ENST00000613642 ASPDHA6ND91 283 aa4.79□□□□□ -1.64
CCL16-206ENST00000613642 CASTOR2A6NHX0 329 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms