RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 OR51T1Q8NGJ9 327 aa7.1□□□□□ -1.27
SNCA-212ENST00000611107 OR6M1Q8NGM8 313 aa7.1□□□□□ -1.27
SNCA-212ENST00000611107 OR13F1Q8NGS4 319 aa7.1□□□□□ -1.27
SNCA-212ENST00000611107 TBC1D15Q8TC07 691 aa7.1□□□□□ -1.27
SNCA-212ENST00000611107 FAM216AQ8WUB2 273 aa7.1□□□□□ -1.27
SNCA-212ENST00000611107 LHX4Q969G2 390 aa7.1□□□□□ -1.27
SNCA-212ENST00000611107 CYYR1Q96J86 154 aa7.1□□□□□ -1.27
SNCA-212ENST00000611107 DCTN5Q9BTE1 182 aa7.1□□□□□ -1.27
SNCA-212ENST00000611107 CENPOQ9BU64 300 aa7.1□□□□□ -1.27
SNCA-212ENST00000611107 SUCNR1Q9BXA5 334 aa7.1□□□□□ -1.27
SNCA-212ENST00000611107 MS4A7Q9GZW8 240 aaPredicted RBP7.1□□□□□ -1.27
SNCA-212ENST00000611107 SLITRK2Q9H156 845 aa7.1□□□□□ -1.27
SNCA-212ENST00000611107 RHOFQ9HBH0 211 aa7.1□□□□□ -1.27
SNCA-212ENST00000611107 EXOSC4Q9NPD3 245 aaKnown RBP7.1□□□□□ -1.27
SNCA-212ENST00000611107 SIRT7Q9NRC8 400 aa7.1□□□□□ -1.27
SNCA-212ENST00000611107 TNFRSF19Q9NS68 423 aa7.1□□□□□ -1.27
SNCA-212ENST00000611107 C19orf12Q9NSK7 152 aa7.1□□□□□ -1.27
SNCA-212ENST00000611107 GSTK1Q9Y2Q3 226 aa7.1□□□□□ -1.27
SNCA-212ENST00000611107 AK6Q9Y3D8 172 aaKnown RBP7.1□□□□□ -1.27
SNCA-212ENST00000611107 TRAV1-2A0A0B4J238 106 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 A0A0U1RQK1 487 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 LOC100506127A0A0U1RQW1 187 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 SMIM30A4D0T7 59 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 K7N7A8 449 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 SIRPB1O00241 398 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 SLC33A1O00400 549 aaPredicted RBP7.09□□□□□ -1.27
SNCA-212ENST00000611107 SLC17A2O00624 439 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 TOX4O94842 621 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 TK1P04183 234 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 PPIAL4GP0DN37 164 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 NDUFB7P17568 137 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 OMGP23515 440 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 PRTN3P24158 256 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 MYL9P24844 172 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 HTR2CP28335 458 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 TGFBR1P36897 503 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 ALDH3B2P48448 385 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 BMXP51813 675 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 QRFPP83859 136 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 RELBQ01201 579 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 SRSF4Q08170 494 aaKnown RBP7.09□□□□□ -1.27
SNCA-212ENST00000611107 BAMBIQ13145 260 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 UNC119Q13432 240 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 IL13RA2Q14627 380 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 PDCD1Q15116 288 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 METTL11BQ5VVY1 283 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 BTNL3Q6UXE8 466 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 SLC16A12Q6ZSM3 486 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 TCF23Q7RTU1 214 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 VMO1Q7Z5L0 202 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 OR8H2Q8N162 312 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 C11orf42Q8N5U0 333 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 OR4S1Q8NGB4 309 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 C8orf46Q8TAG6 207 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 FAM46BQ96A09 425 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 SLC25A28Q96A46 364 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 MED30Q96HR3 178 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 Q96M66 194 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 CHST6Q9GZX3 395 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 METTL9Q9H1A3 318 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 PPA2Q9H2U2 334 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 PRDM13Q9H4Q3 707 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 SEBOXQ9HB31 216 aaPredicted RBP7.09□□□□□ -1.27
SNCA-212ENST00000611107 SSR3Q9UNL2 185 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 ING4Q9UNL4 249 aa7.09□□□□□ -1.27
SNCA-212ENST00000611107 A0A0B4J203 849 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 TRAV24A0A0B4J272 114 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 IGHV1-69DA0A0B4J2H0 117 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 GEMIN2O14893 280 aaKnown RBP7.08□□□□□ -1.28
SNCA-212ENST00000611107 HOXA3O43365 443 aaPredicted RBP7.08□□□□□ -1.28
SNCA-212ENST00000611107 ZNF780AO75290 641 aaPredicted RBP7.08□□□□□ -1.28
SNCA-212ENST00000611107 BPNT1O95861 308 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 IGHV1-69P01742 117 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 TFAP2AP05549 437 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 CHRM2P08172 466 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 MELTFP08582 738 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 VSIG8P0DPA2 414 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 MGMTP16455 207 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 RAB3BP20337 219 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 FPR2P25090 351 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 LMO1P25800 156 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 COMPP49747 757 aaPredicted RBP7.08□□□□□ -1.28
SNCA-212ENST00000611107 CAPZA1P52907 286 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 CLDN12P56749 244 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 KRTAP10-3P60369 221 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 ACTG1P63261 375 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 ZNF273Q14593 569 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 ATXN7L3Q14CW9 347 aaPredicted RBP7.08□□□□□ -1.28
SNCA-212ENST00000611107 P2RY14Q15391 338 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 C11orf91Q3C1V1 193 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 AWAT1Q58HT5 328 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 HES5Q5TA89 166 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 OR10K2Q6IF99 312 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 METAP1DQ6UB28 335 aaPredicted RBP7.08□□□□□ -1.28
SNCA-212ENST00000611107 OSR2Q8N2R0 312 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 OR4M1Q8NGD0 313 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 H1FXQ92522 213 aaKnown RBP7.08□□□□□ -1.28
SNCA-212ENST00000611107 FOXRED1Q96CU9 486 aaPredicted RBP7.08□□□□□ -1.28
SNCA-212ENST00000611107 S100A13Q99584 98 aa7.08□□□□□ -1.28
SNCA-212ENST00000611107 FUNDC2Q9BWH2 189 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms