RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 VPREB3Q9UKI3 123 aa11.78□□□□□ -0.52
HDDC2-204ENST00000608295 ERGIC3Q9Y282 383 aa11.78□□□□□ -0.52
HDDC2-204ENST00000608295 FBN3Q75N90 2809 aa11.78□□□□□ -0.52
HDDC2-204ENST00000608295 TRAV39A0A0B4J263 110 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 TRBV5-5A0A0J9YX44 114 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 C17orf98A8MV24 154 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 SLC33A1O00400 549 aaPredicted RBP11.77□□□□□ -0.53
HDDC2-204ENST00000608295 CLPXO76031 633 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 MAS1P04201 325 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 CDK1P06493 297 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 RPS11P62280 158 aaKnown RBP eCLIP11.77□□□□□ -0.53
HDDC2-204ENST00000608295 LTC4SQ16873 150 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 Q499Y3 187 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 KRBOX4Q5JUW0 171 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 C6orf141Q5SZD1 244 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 ZNF529Q6P280 563 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 SAXO1Q8IYX7 474 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 DYNAPQ8N1N2 210 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 DYRK2Q92630 601 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 MUL1Q969V5 352 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 CPNE2Q96FN4 548 aaPredicted RBP11.77□□□□□ -0.53
HDDC2-204ENST00000608295 COQ2Q96H96 371 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 OR5M11Q96RB7 305 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 TMED9Q9BVK6 235 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 TMEM138Q9NPI0 162 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 FKBP14Q9NWM8 211 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 CKLFQ9UBR5 152 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 LINC00312Q9Y6C7 94 aa11.77□□□□□ -0.53
HDDC2-204ENST00000608295 TRGV10A0A0A0MS01 117 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 A0A0G2JK05 382 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 GDNFP39905 211 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 MTNR1BP49286 362 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 RAB13P51153 203 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 TAS2R43P59537 309 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 MED22Q15528 200 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 FAM189A2Q15884 450 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 SSX2Q16385 188 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 LRRC75BQ2VPJ9 315 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 SLC22A6Q4U2R8 563 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 MIDNQ504T8 468 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 YIF1BQ5BJH7 314 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 LDLRAD2Q5SZI1 272 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 FAM27D1Q5T7N8 215 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 NANOGP1Q8N7R0 232 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 OR13D1Q8NGV5 346 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 OR4F5Q8NH21 305 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 NDNFQ8TB73 568 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 AJUBAQ96IF1 538 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 CNBD2Q96M20 576 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 S100A13Q99584 98 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 CCDC90BQ9GZT6 254 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 PLCXD1Q9NUJ7 323 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 SCN3BQ9NY72 215 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 HILPDAQ9Y5L2 63 aa11.76□□□□□ -0.53
HDDC2-204ENST00000608295 IGHV2-26A0A0B4J1V2 119 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 ODAMA1E959 279 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 OR7C1O76099 320 aaPredicted RBP11.75□□□□□ -0.53
HDDC2-204ENST00000608295 ALX3O95076 343 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 IGHV3-7P01780 117 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 CSTBP04080 98 aaKnown RBP11.75□□□□□ -0.53
HDDC2-204ENST00000608295 HSMCR30P0CW71 290 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 IGFBP3P17936 291 aaPredicted RBP11.75□□□□□ -0.53
HDDC2-204ENST00000608295 CDK2P24941 298 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 PTGFRP43088 359 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 MEF2CQ06413 473 aaPredicted RBP11.75□□□□□ -0.53
HDDC2-204ENST00000608295 UTF1Q5T230 341 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 HIST2H2BDQ6DRA6 164 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 BRICD5Q6PL45 260 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 BEND2Q8NDZ0 799 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 PXT1Q8NFP0 134 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 UBALD1Q8TB05 177 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 PLPPR1Q8TBJ4 325 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 CYYR1Q96J86 154 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 DERL3Q96Q80 235 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 ZNF747Q9BV97 191 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 MND1Q9BWT6 205 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 CDCA4Q9BXL8 241 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 METTL9Q9H1A3 318 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 KIF25Q9UIL4 384 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 SESN1Q9Y6P5 492 aa11.75□□□□□ -0.53
HDDC2-204ENST00000608295 MEIKINA0A087WXM9 373 aa11.74□□□□□ -0.53
HDDC2-204ENST00000608295 TRBV5-7A0A0A0MS05 114 aa11.74□□□□□ -0.53
HDDC2-204ENST00000608295 TRAV24A0A0B4J272 114 aa11.74□□□□□ -0.53
HDDC2-204ENST00000608295 ODF3BA8MYP8 253 aa11.74□□□□□ -0.53
HDDC2-204ENST00000608295 GEMIN2O14893 280 aaKnown RBP11.74□□□□□ -0.53
HDDC2-204ENST00000608295 PIN1P1O15428 100 aa11.74□□□□□ -0.53
HDDC2-204ENST00000608295 FSTP19883 344 aa11.74□□□□□ -0.53
HDDC2-204ENST00000608295 NFYBP25208 207 aa11.74□□□□□ -0.53
HDDC2-204ENST00000608295 TGFBR2P37173 567 aa11.74□□□□□ -0.53
HDDC2-204ENST00000608295 RBM11P57052 281 aaKnown RBP11.74□□□□□ -0.53
HDDC2-204ENST00000608295 RBM39Q14498 530 aaKnown RBP11.74□□□□□ -0.53
HDDC2-204ENST00000608295 ATAD3CQ5T2N8 411 aa11.74□□□□□ -0.53
HDDC2-204ENST00000608295 ZNF626Q68DY1 528 aa11.74□□□□□ -0.53
HDDC2-204ENST00000608295 AWAT2Q6E213 333 aa11.74□□□□□ -0.53
HDDC2-204ENST00000608295 GDPGP1Q6ZNW5 385 aa11.74□□□□□ -0.53
HDDC2-204ENST00000608295 Q6ZSV7 163 aa11.74□□□□□ -0.53
HDDC2-204ENST00000608295 TMEM219Q86XT9 240 aa11.74□□□□□ -0.53
HDDC2-204ENST00000608295 OSR2Q8N2R0 312 aa11.74□□□□□ -0.53
HDDC2-204ENST00000608295 NEK7Q8TDX7 302 aa11.74□□□□□ -0.53
HDDC2-204ENST00000608295 WFDC12Q8WWY7 111 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms