RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 TSPAN7P41732 249 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 HAAOP46952 286 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 PEA15Q15121 130 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 C6orf15Q6UXA7 325 aaPredicted RBP11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 HSD17B11Q8NBQ5 300 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 C2CD4CQ8TF44 421 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 EXTL1Q92935 676 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 THOC3Q96J01 351 aaKnown RBP11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 LOXL2Q9Y4K0 774 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 FAM186AA6NE01 2351 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 C5orf49A4QMS7 147 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 NKX2-6A6NCS4 301 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 GLAP06280 429 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 SCTP09683 121 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 SEC11BP0C7V7 166 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 SPP1P10451 314 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 RPL35P42766 123 aaKnown RBP11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 P2RY1P47900 373 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 RAB13P51153 203 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 GPM6AP51674 278 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 GPR157Q5UAW9 335 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 TUSC5Q8IXB3 177 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 ZFP82Q8N141 532 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 SUMF1Q8NBK3 374 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 SIGLEC12Q96PQ1 595 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 USB1Q9BQ65 265 aaKnown RBP11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 GINS3Q9BRX5 216 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 REPIN1Q9BWE0 567 aaKnown RBP11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 SCRT1Q9BWW7 348 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 CALHM2Q9HA72 323 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 CACFD1Q9UGQ2 172 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 MRPS18CQ9Y3D5 142 aaKnown RBP11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 ZNF175Q9Y473 711 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 RFNGQ9Y644 331 aa11.16□□□□□ -0.62
SRGAP2-209ENST00000604247 BORCS7-ASMTA0A0B4J1R7 106 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 A0A1W2PNU3 283 aaPredicted RBP11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 RPL36A-HNRNPH2H7BZ11 118 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 HEXAP06865 529 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 SNCAP37840 140 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 AKR1D1P51857 326 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 PRDX4Q13162 271 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 IL13RA2Q14627 380 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 CCDC71LQ8N9Z2 235 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 OR4D5Q8NGN0 318 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 HPSE2Q8WWQ2 592 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 TECTBQ96PL2 329 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 FBXO9Q9UK97 447 aaPredicted RBP11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 PQLC2LA1A4F0 135 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 COLCA2A8K830 154 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 C3orf80F5H4A9 247 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 SPIN3Q5JUX0 258 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 PLSCR2Q9NRY7 297 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 TMED3Q9Y3Q3 217 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 KLF2Q9Y5W3 355 aaPredicted RBP11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 POMT1Q9Y6A1 747 aa11.15□□□□□ -0.62
SRGAP2-209ENST00000604247 LOC400499M0QZD8 3231 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 A0A1B0GV50 99 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 FAM24AA6NFZ4 105 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 NEURL1O76050 574 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 NGFP01138 241 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 PRH1P02810 166 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 CAMLGP49069 296 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 TSC22D1Q15714 1073 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 TBC1D26Q86UD7 250 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 TMEM45BQ96B21 275 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 EIF5A2Q9GZV4 153 aaKnown RBP11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 TMEM222Q9H0R3 208 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 ESRP2Q9H6T0 727 aaKnown RBP11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 MTCH1Q9NZJ7 389 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 BOKQ9UMX3 212 aaPredicted RBP11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 KNTC1P50748 2209 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 MED13Q9UHV7 2174 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 KCNJ3P48549 501 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 LHX2P50458 406 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 POLR2GP62487 172 aaKnown RBP eCLIP11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 GNMTQ14749 295 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 HERPUD1Q15011 391 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 GUK1Q16774 197 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 DBX2Q6ZNG2 339 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 ZNF818PQ6ZRF7 136 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 DPPA2Q7Z7J5 298 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 IQCF2Q8IXL9 164 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 Q8NFD4 153 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 OR2M7Q8NG81 312 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 CLCC1Q96S66 551 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 Q9N2K0 584 aa11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 UBE2J1Q9Y385 318 aaPredicted RBP11.14□□□□□ -0.63
SRGAP2-209ENST00000604247 ESPL1Q14674 2120 aa11.13□□□□□ -0.63
SRGAP2-209ENST00000604247 IGKV3D-15A0A087WSY6 115 aa11.13□□□□□ -0.63
SRGAP2-209ENST00000604247 IGKV1D-13A0A0B4J2D9 117 aa11.13□□□□□ -0.63
SRGAP2-209ENST00000604247 FAM166BA8MTA8 275 aa11.13□□□□□ -0.63
SRGAP2-209ENST00000604247 ZNF732B4DXR9 585 aa11.13□□□□□ -0.63
SRGAP2-209ENST00000604247 TRDCB7Z8K6 153 aa11.13□□□□□ -0.63
SRGAP2-209ENST00000604247 IGKV1-13P0DP09 117 aa11.13□□□□□ -0.63
SRGAP2-209ENST00000604247 OMGP23515 440 aa11.13□□□□□ -0.63
SRGAP2-209ENST00000604247 ACP1P24666 158 aa11.13□□□□□ -0.63
SRGAP2-209ENST00000604247 PMELP40967 661 aa11.13□□□□□ -0.63
SRGAP2-209ENST00000604247 EWSR1Q01844 656 aaKnown RBP eCLIP11.13□□□□□ -0.63
SRGAP2-209ENST00000604247 AVPI1Q5T686 147 aa11.13□□□□□ -0.63
SRGAP2-209ENST00000604247 BOD1Q96IK1 185 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms