RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 ZNF780BQ9Y6R6 833 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 NUP210Q8TEM1 1887 aaPredicted RBP8.59□□□□□ -1.03
NFKB1-212ENST00000600343 DUXBA0A1W2PPF3 345 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 ZNF732B4DXR9 585 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 TNFSF12O43508 249 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 CKS1BP61024 79 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 LCN6P62502 163 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 ELAVL3Q14576 367 aaKnown RBP8.59□□□□□ -1.03
NFKB1-212ENST00000600343 C1orf100Q5SVJ3 147 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 SHISA2Q6UWI4 295 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 OR2C3Q8N628 320 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 OR1B1Q8NGR6 318 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 SPACA9Q96E40 222 aaPredicted RBP8.59□□□□□ -1.03
NFKB1-212ENST00000600343 C16orf70Q9BSU1 422 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 WNT10AQ9GZT5 417 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 WDR76Q9H967 626 aa8.59□□□□□ -1.03
NFKB1-212ENST00000600343 FEZF1A0PJY2 475 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 APBA3O96018 575 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 CRISP2P16562 243 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 IGFBP3P17936 291 aaPredicted RBP8.58□□□□□ -1.04
NFKB1-212ENST00000600343 CSNK2A2P19784 350 aaPredicted RBP8.58□□□□□ -1.04
NFKB1-212ENST00000600343 AADACP22760 399 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 OTX1P32242 354 aaPredicted RBP8.58□□□□□ -1.04
NFKB1-212ENST00000600343 SLC6A8P48029 635 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 LINC00310P59036 64 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 CSNK2A1P68400 391 aaPredicted RBP8.58□□□□□ -1.04
NFKB1-212ENST00000600343 TRMT12Q53H54 448 aaKnown RBP8.58□□□□□ -1.04
NFKB1-212ENST00000600343 MUC15Q8N387 334 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 CSNK2A3Q8NEV1 391 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 OR1K1Q8NGR3 316 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 ST6GALNAC5Q9BVH7 336 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 GTSF1LQ9H1H1 148 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 TMEM38BQ9NVV0 291 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 TRAV1-1A0A0B4J248 108 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 KBTBD11O94819 623 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 KLKB1P03952 638 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 FSTP19883 344 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 CDKN2AP42771 156 aaKnown RBP8.58□□□□□ -1.04
NFKB1-212ENST00000600343 EMP2P54851 167 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 FOXL2P58012 376 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 PPP1CBP62140 327 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 PSG9Q00887 426 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 C5orf17Q8NAS9 161 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 OR52M1Q8NGK5 317 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 SFRP2Q96HF1 295 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 UHRF2Q96PU4 802 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 TRAPPC2LH3BP13 241 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 IFNA1P01562 189 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 HLA-HP01893 362 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 SMIM10L2AP0DMW4 78 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 SMIM10L2BP0DMW5 78 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 ARFRP1Q13795 201 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 ZNF74Q16587 644 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 OR5C1Q8NGR4 320 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 AGMATQ9BSE5 352 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 HDAC8Q9BY41 377 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 ABT1Q9ULW3 272 aaKnown RBP8.58□□□□□ -1.04
NFKB1-212ENST00000600343 TMEM14AQ9Y6G1 99 aa8.58□□□□□ -1.04
NFKB1-212ENST00000600343 A0A1B0GWA3 101 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 SERINC4A6NH21 518 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 METAP1P53582 386 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 BAXQ07812 192 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 HIST3H3Q16695 136 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 LRRC73Q5JTD7 316 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 PRAMEF5Q5TYX0 476 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 PRAMEF6Q5VXH4 476 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 TCF23Q7RTU1 214 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 ATOH7Q8N100 152 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 BATF2Q8N1L9 274 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 TMEM171Q8WVE6 324 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 LIN37Q96GY3 246 aaPredicted RBP8.57□□□□□ -1.04
NFKB1-212ENST00000600343 OR51B4Q9Y5P0 310 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 SOX1O00570 391 aaPredicted RBP8.57□□□□□ -1.04
NFKB1-212ENST00000600343 ARPC3O15145 178 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 HAND1O96004 215 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 DBIP07108 87 aaKnown RBP8.57□□□□□ -1.04
NFKB1-212ENST00000600343 DUSP1P28562 367 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 CLDN15P56746 228 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 TMEM267Q0VDI3 215 aaPredicted RBP8.57□□□□□ -1.04
NFKB1-212ENST00000600343 PLPPR5Q32ZL2 321 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 SP6Q3SY56 376 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 CPEB2Q7Z5Q1 589 aaKnown RBP8.57□□□□□ -1.04
NFKB1-212ENST00000600343 DEFB128Q7Z7B8 93 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 OR8I2Q8N0Y5 310 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 SCAMP4Q969E2 229 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 WBP2Q969T9 261 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 GUCD1Q96NT3 240 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 AMELYQ99218 206 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 RBM24Q9BX46 236 aaKnown RBP8.57□□□□□ -1.04
NFKB1-212ENST00000600343 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 IGSF23A1L1A6 192 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 BNIP3LO60238 219 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 LDB3O75112 727 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 ZNF253O75346 499 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 VSIG8P0DPA2 414 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 ARG2P78540 354 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 SMAD3P84022 425 aaKnown RBP8.57□□□□□ -1.04
NFKB1-212ENST00000600343 HTD2P86397 168 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 MEP1BQ16820 701 aa8.57□□□□□ -1.04
NFKB1-212ENST00000600343 LYZL2Q7Z4W2 148 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms