RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 AESQ08117 197 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 CCDC58Q4VC31 144 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 ZNF691Q5VV52 312 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 ELP2Q6IA86 826 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 ZNF529Q6P280 563 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 ZNF555Q8NEP9 628 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 OR4P4Q8NGL7 312 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 APH1BQ8WW43 257 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 CREB3L1Q96BA8 519 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 PDCD1LG2Q9BQ51 273 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 NCOR1P1Q9H4R4 102 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 FGF20Q9NP95 211 aaPredicted RBP12.72□□□□□ -0.37
VRK3-221ENST00000600284 SERTAD4Q9NUC0 356 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 DPM3Q9P2X0 92 aa12.72□□□□□ -0.37
VRK3-221ENST00000600284 TET2Q6N021 2002 aaPredicted RBP12.72□□□□□ -0.37
VRK3-221ENST00000600284 ODAMA1E959 279 aa12.71□□□□□ -0.37
VRK3-221ENST00000600284 SLC33A1O00400 549 aaPredicted RBP12.71□□□□□ -0.37
VRK3-221ENST00000600284 MAGEB3O15480 346 aa12.71□□□□□ -0.37
VRK3-221ENST00000600284 LIMS3P0CW19 117 aa12.71□□□□□ -0.37
VRK3-221ENST00000600284 LIMS4P0CW20 117 aa12.71□□□□□ -0.37
VRK3-221ENST00000600284 RAB3AP20336 220 aa12.71□□□□□ -0.37
VRK3-221ENST00000600284 CDK2P24941 298 aa12.71□□□□□ -0.37
VRK3-221ENST00000600284 DCKP27707 260 aa12.71□□□□□ -0.37
VRK3-221ENST00000600284 CD34P28906 385 aa12.71□□□□□ -0.37
VRK3-221ENST00000600284 GLIPR1P48060 266 aa12.71□□□□□ -0.37
VRK3-221ENST00000600284 SCN1BQ07699 218 aa12.71□□□□□ -0.37
VRK3-221ENST00000600284 CDK5R1Q15078 307 aa12.71□□□□□ -0.37
VRK3-221ENST00000600284 KRBOX4Q5JUW0 171 aa12.71□□□□□ -0.37
VRK3-221ENST00000600284 RPL22L1Q6P5R6 122 aaKnown RBP12.71□□□□□ -0.37
VRK3-221ENST00000600284 C16orf82Q7Z2V1 217 aa12.71□□□□□ -0.37
VRK3-221ENST00000600284 TMEM219Q86XT9 240 aa12.71□□□□□ -0.37
VRK3-221ENST00000600284 Q8NFD4 153 aa12.71□□□□□ -0.37
VRK3-221ENST00000600284 TSEN15Q8WW01 171 aaKnown RBP12.71□□□□□ -0.37
VRK3-221ENST00000600284 SMPD3Q9NY59 655 aaPredicted RBP12.71□□□□□ -0.37
VRK3-221ENST00000600284 OR6C3Q9NZP0 311 aa12.71□□□□□ -0.37
VRK3-221ENST00000600284 A0A087X0M5 115 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 A0A1B0GX30 115 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 IRGMA1A4Y4 181 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 ZNF729A6NN14 1252 aaPredicted RBP12.7□□□□□ -0.38
VRK3-221ENST00000600284 LEUTXA8MZ59 168 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 IGLV1-47P01700 117 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 OPN1MWP04001 364 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 ALDOBP05062 364 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 CD2P06729 351 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 OPN1MW2P0DN77 364 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 OPN1MW3P0DN78 364 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 BRS3P32247 399 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 PTGFRP43088 359 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 ARHGDIBP52566 201 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 EMX1Q04741 257 aaPredicted RBP12.7□□□□□ -0.38
VRK3-221ENST00000600284 PRAMEF5Q5TYX0 476 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 TMPRSS11AQ6ZMR5 421 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 OR4D6Q8NGJ1 314 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 OR51T1Q8NGJ9 327 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 GPR148Q8TDV2 347 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 WNT10AQ9GZT5 417 aa12.7□□□□□ -0.38
VRK3-221ENST00000600284 FBXO24O75426 580 aa12.69□□□□□ -0.38
VRK3-221ENST00000600284 WBP4O75554 376 aaKnown RBP12.69□□□□□ -0.38
VRK3-221ENST00000600284 CEACAM3P40198 252 aa12.69□□□□□ -0.38
VRK3-221ENST00000600284 GTF2A1P52655 376 aaPredicted RBP12.69□□□□□ -0.38
VRK3-221ENST00000600284 PRRX1P54821 245 aa12.69□□□□□ -0.38
VRK3-221ENST00000600284 PAX5Q02548 391 aa12.69□□□□□ -0.38
VRK3-221ENST00000600284 IL13RA2Q14627 380 aa12.69□□□□□ -0.38
VRK3-221ENST00000600284 ZSCAN26Q16670 478 aa12.69□□□□□ -0.38
VRK3-221ENST00000600284 ASCL4Q6XD76 172 aa12.69□□□□□ -0.38
VRK3-221ENST00000600284 C11orf44Q8N8P7 122 aa12.69□□□□□ -0.38
VRK3-221ENST00000600284 ZNF565Q8N9K5 539 aa12.69□□□□□ -0.38
VRK3-221ENST00000600284 WIPF2Q8TF74 440 aaPredicted RBP12.69□□□□□ -0.38
VRK3-221ENST00000600284 COQ2Q96H96 371 aa12.69□□□□□ -0.38
VRK3-221ENST00000600284 AKR1E2Q96JD6 320 aa12.69□□□□□ -0.38
VRK3-221ENST00000600284 GPER1Q99527 375 aa12.69□□□□□ -0.38
VRK3-221ENST00000600284 BARHL1Q9BZE3 327 aa12.69□□□□□ -0.38
VRK3-221ENST00000600284 KBTBD11-OT1A0A1B0GTJ5 212 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 OOSP1A8MZH6 123 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 H0YJX3 145 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 TOR1AO14656 332 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 PEX14O75381 377 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 BAG2O95816 211 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 CGB3P0DN86 165 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 CGB7P0DN87 165 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 JUNBP17275 347 aaPredicted RBP12.68□□□□□ -0.38
VRK3-221ENST00000600284 KCNJ3P48549 501 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 BLCAPP62952 87 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 HABP2Q14520 560 aaPredicted RBP12.68□□□□□ -0.38
VRK3-221ENST00000600284 SMN1Q16637 294 aaKnown RBP12.68□□□□□ -0.38
VRK3-221ENST00000600284 HLA-DRB5Q30154 266 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 CNIH3Q8TBE1 160 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 TNFAIP8L1Q8WVP5 186 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 STMN2Q93045 179 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 LIN7BQ9HAP6 207 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 C8orf4Q9NR00 106 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 BABAM2Q9NXR7 383 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 NOTCH1P46531 2555 aa12.68□□□□□ -0.38
VRK3-221ENST00000600284 BUB1B-PAK6H3BSN5 160 aa12.67□□□□□ -0.38
VRK3-221ENST00000600284 GABRPO00591 440 aa12.67□□□□□ -0.38
VRK3-221ENST00000600284 C21orf33P30042 268 aaPredicted RBP12.67□□□□□ -0.38
VRK3-221ENST00000600284 ETV1P50549 477 aa12.67□□□□□ -0.38
VRK3-221ENST00000600284 ATXN7L3Q14CW9 347 aaPredicted RBP12.67□□□□□ -0.38
VRK3-221ENST00000600284 RSU1Q15404 277 aa12.67□□□□□ -0.38
VRK3-221ENST00000600284 C17orf58Q2M2W7 97 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms