RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 ANKRD65E5RJM6 399 aa13.66□□□□□ -0.22
SMG9-210ENST00000600097 BUB1B-PAK6H3BSN5 160 aa13.66□□□□□ -0.22
SMG9-210ENST00000600097 SIRPB1O00241 398 aa13.66□□□□□ -0.22
SMG9-210ENST00000600097 PRKACBP22694 351 aa13.66□□□□□ -0.22
SMG9-210ENST00000600097 PRRX1P54821 245 aa13.66□□□□□ -0.22
SMG9-210ENST00000600097 C9orf152Q5JTZ5 239 aa13.66□□□□□ -0.22
SMG9-210ENST00000600097 TPTE2P1Q5T6R2 138 aa13.66□□□□□ -0.22
SMG9-210ENST00000600097 BAIAP2L2Q6UXY1 529 aa13.66□□□□□ -0.22
SMG9-210ENST00000600097 OR4D6Q8NGJ1 314 aa13.66□□□□□ -0.22
SMG9-210ENST00000600097 ZMAT5Q9UDW3 170 aaKnown RBP13.66□□□□□ -0.22
SMG9-210ENST00000600097 A0A087X0M5 115 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 A0A1B0GX30 115 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 SH2D7A6NKC9 451 aaPredicted RBP13.65□□□□□ -0.22
SMG9-210ENST00000600097 OR2H2O95918 312 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 FAM106CPP0CH98 169 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 LMO1P25800 156 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 EPHA2P29317 976 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 SLC6A1P30531 599 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 PTGFRP43088 359 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 SNU13P55769 128 aaKnown RBP13.65□□□□□ -0.22
SMG9-210ENST00000600097 PDZK1IP1Q13113 114 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 LHFPL2Q6ZUX7 228 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 UTS2BQ765I0 119 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 SPSB1Q96BD6 273 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 ZNF649Q9BS31 505 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 ZNF286AQ9HBT8 521 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 PCDHB16Q9NRJ7 776 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 GSTK1Q9Y2Q3 226 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 MOB4Q9Y3A3 225 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 HSPE1-MOB4S4R3N1 261 aa13.65□□□□□ -0.22
SMG9-210ENST00000600097 IGKV1-9A0A0C4DH69 117 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 ODAMA1E959 279 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 FAM172BPA6NC97 362 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 LY6LH3BQJ8 138 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 CSN2P05814 226 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 CALCBP10092 127 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 ATF1P18846 271 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 HTR1FP30939 366 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 ATP6V1E1P36543 226 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 POLR2IP36954 125 aaKnown RBP13.64□□□□□ -0.23
SMG9-210ENST00000600097 GLIPR1P48060 266 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 THBS3P49746 956 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 AESQ08117 197 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 RCN1Q15293 331 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 TMEM244Q5VVB8 128 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 ETV3LQ6ZN32 361 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 FAM220AQ7Z4H9 259 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 THNSL2Q86YJ6 484 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 PRSS35Q8N3Z0 413 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 OR10H4Q8NGA5 316 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 OR8J1Q8NGP2 316 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 CHPT1Q8WUD6 406 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 ADAT3Q96EY9 351 aaPredicted RBP13.64□□□□□ -0.23
SMG9-210ENST00000600097 HRASLS5Q96KN8 279 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 COMMD4Q9H0A8 199 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 RHOFQ9HBH0 211 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 C8orf4Q9NR00 106 aa13.64□□□□□ -0.23
SMG9-210ENST00000600097 OCM2P0CE71 109 aa13.63□□□□□ -0.23
SMG9-210ENST00000600097 OCMP0CE72 109 aaPredicted RBP13.63□□□□□ -0.23
SMG9-210ENST00000600097 GDNFP39905 211 aa13.63□□□□□ -0.23
SMG9-210ENST00000600097 OR3A4PP47883 348 aa13.63□□□□□ -0.23
SMG9-210ENST00000600097 RPL23AP62750 156 aaKnown RBP13.63□□□□□ -0.23
SMG9-210ENST00000600097 RBM39Q14498 530 aaKnown RBP13.63□□□□□ -0.23
SMG9-210ENST00000600097 ZIK1Q3SY52 487 aaPredicted RBP13.63□□□□□ -0.23
SMG9-210ENST00000600097 UNQ9370/PRO34162Q6UXP9 181 aa13.63□□□□□ -0.23
SMG9-210ENST00000600097 RDH10Q8IZV5 341 aa13.63□□□□□ -0.23
SMG9-210ENST00000600097 CHST4Q8NCG5 386 aa13.63□□□□□ -0.23
SMG9-210ENST00000600097 TRUB1Q8WWH5 349 aaKnown RBP13.63□□□□□ -0.23
SMG9-210ENST00000600097 RPEQ96AT9 228 aa13.63□□□□□ -0.23
SMG9-210ENST00000600097 OPALINQ96PE5 141 aa13.63□□□□□ -0.23
SMG9-210ENST00000600097 DCLRE1BQ9H816 532 aa13.63□□□□□ -0.23
SMG9-210ENST00000600097 ZFP57Q9NU63 452 aa13.63□□□□□ -0.23
SMG9-210ENST00000600097 IMPAD1Q9NX62 359 aa13.63□□□□□ -0.23
SMG9-210ENST00000600097 FAM90A18PA6NE21 464 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 FAM90A16PA6NEW6 464 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 FAM90A20PA6NIJ5 464 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 ZNF729A6NN14 1252 aaPredicted RBP13.62□□□□□ -0.23
SMG9-210ENST00000600097 FAM90A9PA6NNJ1 464 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 FAM90A12PA8MX19 464 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 FAM90A5PA8MXJ8 464 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 KDM4BO94953 1096 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 FAM90A15PP0C7V4 464 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 FAM90A13PP0C7W8 464 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 FAM90A14PP0C7W9 464 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 FAM90A24PP0C7X0 464 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 ZNF44P15621 663 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 ZNF20P17024 532 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 MYCNOSP40205 109 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 KIR3DL2P43630 455 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 ISL1P61371 349 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 TMED1Q13445 227 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 KRBOX4Q5JUW0 171 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 OR2W3Q7Z3T1 314 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 ZNF329Q86UD4 541 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 OR9G1Q8NH87 305 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 TOMM40LQ969M1 308 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 RDH12Q96NR8 316 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 SLC29A1Q99808 456 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 OR6C3Q9NZP0 311 aa13.62□□□□□ -0.23
SMG9-210ENST00000600097 GNG8Q9UK08 70 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms