RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 FGF12P61328 243 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 PDCD1Q15116 288 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 AVPI1Q5T686 147 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 ELP2Q6IA86 826 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 C1orf229Q6ZS94 237 aaPredicted RBP10.57□□□□□ -0.72
UPF1-208ENST00000600012 PEG10Q86TG7 708 aaKnown RBP10.57□□□□□ -0.72
UPF1-208ENST00000600012 FAM58AQ8N1B3 248 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 CELF2-AS1Q8N7Q2 184 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 Q8NFD4 153 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 OR56B1Q8NGI3 324 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 OR10R2Q8NGX6 335 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 LRRC29Q8WV35 223 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 DIRC2Q96SL1 478 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 NRIP2Q9BQI9 281 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 SUCNR1Q9BXA5 334 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 AUNIPQ9H7T9 357 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 ZMAT3Q9HA38 289 aaKnown RBP10.57□□□□□ -0.72
UPF1-208ENST00000600012 FN3KRPQ9HA64 309 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 PCDHB16Q9NRJ7 776 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 ABCB10Q9NRK6 738 aa10.57□□□□□ -0.72
UPF1-208ENST00000600012 ELF5Q9UKW6 265 aaPredicted RBP10.57□□□□□ -0.72
UPF1-208ENST00000600012 MGAM2Q2M2H8 2515 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 ARHGAP32A7KAX9 2087 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 A0A0A6YYH2 397 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 TMEM235A6NFC5 223 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 A6NJ64 397 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 J3QLI3 93 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 GEMIN2O14893 280 aaKnown RBP10.56□□□□□ -0.72
UPF1-208ENST00000600012 WIPF1O43516 503 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 SCGNO76038 276 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 NXPH2O95156 264 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 AVPP01185 164 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 CHRM2P08172 466 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 DUSP1P28562 367 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 BLVRBP30043 206 aaPredicted RBP10.56□□□□□ -0.72
UPF1-208ENST00000600012 MNDAP41218 407 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 GATA4P43694 442 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 TMEM50BP56557 158 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 ERVK11-1P61568 191 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 DGCR2P98153 550 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 PITPNAQ00169 270 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 GUCA2AQ02747 115 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 DCTN2Q13561 401 aaKnown RBP10.56□□□□□ -0.72
UPF1-208ENST00000600012 BAK1Q16611 211 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 NKAPLQ5M9Q1 402 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 OLFML2AQ68BL7 652 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 RAB12Q6IQ22 244 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 C16orf87Q6PH81 154 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 OR8H2Q8N162 312 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 Q8N402 240 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 FAM89BQ8N5H3 189 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 GDPD1Q8N9F7 314 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 BOLLQ8N9W6 283 aaKnown RBP10.56□□□□□ -0.72
UPF1-208ENST00000600012 SEH1LQ96EE3 360 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 MRPS24Q96EL2 167 aaKnown RBP10.56□□□□□ -0.72
UPF1-208ENST00000600012 TIMD4Q96H15 378 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 ARHGAP5-AS1Q96IT6 56 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 TMPRSS13Q9BYE2 586 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 SAP30LQ9HAJ7 183 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 DECR2Q9NUI1 292 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 DCAF16Q9NXF7 216 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 WIPI2Q9Y4P8 454 aa10.56□□□□□ -0.72
UPF1-208ENST00000600012 MEIOCA2RUB1 952 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 UPK1BO75841 260 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 CYB5R3P00387 301 aaPredicted RBP10.55□□□□□ -0.72
UPF1-208ENST00000600012 IGHV2-5P01817 119 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 IL7P13232 177 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 HIST1H1DP16402 221 aaKnown RBP10.55□□□□□ -0.72
UPF1-208ENST00000600012 GNB3P16520 340 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 GLRA1P23415 457 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 GATA3P23771 443 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 CD80P33681 288 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 IFITM3Q01628 133 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 FAM189A2Q15884 450 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 HFEQ30201 348 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 ZNF260Q3ZCT1 412 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 NHLRC3Q5JS37 347 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 PLAC9Q5JTB6 97 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 FAM209AQ5JX71 171 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 DCAF12L2Q5VW00 463 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 SIGIRRQ6IA17 410 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 Q6ZTK2 550 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 Q8IYB0 196 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 BPIFB2Q8N4F0 458 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 OR10Z1Q8NGY1 313 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 NANPQ8TBE9 248 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 RAB1CQ92928 201 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 RAB3CQ96E17 227 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 CCDC32Q9BV29 185 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 EGLN1Q9GZT9 426 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 WDR13Q9H1Z4 485 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 HES4Q9HCC6 221 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 GCM1Q9NP62 436 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 CACNG2Q9Y698 323 aa10.55□□□□□ -0.72
UPF1-208ENST00000600012 A0A1W2PQ09 198 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 MEIS3P1A6NDR6 274 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 SRRM5B3KS81 715 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 MFNGO00587 321 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 CTDSPLO15194 276 aa10.54□□□□□ -0.72
UPF1-208ENST00000600012 LANCL1O43813 399 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms