RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 HERPUD1Q15011 391 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 OR2A2Q6IF42 318 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 FAM58AQ8N1B3 248 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 SCCPDHQ8NBX0 429 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 MBD3L2Q8NHZ7 208 aaPredicted RBP12.31□□□□□ -0.44
VRK3-217ENST00000599538 THAP6Q8TBB0 222 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 NEK7Q8TDX7 302 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 RRNAD1Q96FB5 475 aaKnown RBP12.31□□□□□ -0.44
VRK3-217ENST00000599538 AUP1Q9Y679 476 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 J3QT63 122 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 J3QW42 95 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 RAC2P15153 192 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 FAM76BQ5HYJ3 339 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 SGPP2Q8IWX5 399 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 OR5T2Q8NGG2 359 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 MOB3AQ96BX8 217 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 POM121Q96HA1 1249 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 ADAT1Q9BUB4 502 aaKnown RBP12.31□□□□□ -0.44
VRK3-217ENST00000599538 OR5AC2Q9NZP5 309 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 PROCRQ9UNN8 238 aa12.31□□□□□ -0.44
VRK3-217ENST00000599538 IGKV1-6A0A0C4DH72 117 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 IQCF6A8MYZ5 107 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 CDIPTO14735 213 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 BET1O15155 118 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 B3GALNT1O75752 331 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 SNAPC5O75971 98 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 OR5AC1P0C628 307 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 HOXC12P31275 282 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 ECI1P42126 302 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 IL15RAQ13261 267 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 RAB32Q13637 225 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 ACOT7LQ6ZUV0 252 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 POC1AQ8NBT0 407 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 RTN4IP1Q8WWV3 396 aaPredicted RBP12.3□□□□□ -0.44
VRK3-217ENST00000599538 MRPL24Q96A35 216 aaKnown RBP12.3□□□□□ -0.44
VRK3-217ENST00000599538 CXorf58Q96LI9 332 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 RTL8AQ9BWD3 113 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 PKIBQ9C010 78 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 SLC2A9Q9NRM0 540 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 GSKIPQ9P0R6 139 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 TINAGQ9UJW2 476 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 NBEAQ8NFP9 2946 aa12.3□□□□□ -0.44
VRK3-217ENST00000599538 A0A0D9SG52 128 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 MSGN1A6NI15 193 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 MLNRO43193 412 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 OR2F2O95006 317 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 PPYP01298 95 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 GRPP07492 148 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 NMBP08949 121 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 RCC1P18754 421 aaPredicted RBP12.29□□□□□ -0.44
VRK3-217ENST00000599538 FOXC1Q12948 553 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 OR2F1Q13607 317 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 ZNF345Q14585 488 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 ESCO2Q56NI9 601 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 SLC51BQ86UW2 128 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 COMMD7Q86VX2 200 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 RELL2Q8NC24 303 aaPredicted RBP12.29□□□□□ -0.44
VRK3-217ENST00000599538 C1orf162Q8NEQ5 155 aaPredicted RBP12.29□□□□□ -0.44
VRK3-217ENST00000599538 DCUN1D4Q92564 292 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 BOD1Q96IK1 185 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 GPHA2Q96T91 129 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 TRAV39A0A0B4J263 110 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 IGHV1-18A0A0C4DH31 117 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 TEX46H3BTG2 121 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 HOXB1P14653 301 aaPredicted RBP12.29□□□□□ -0.44
VRK3-217ENST00000599538 LUMP51884 338 aaPredicted RBP12.29□□□□□ -0.44
VRK3-217ENST00000599538 RAB14P61106 215 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 ALKBH2Q6NS38 261 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 Q6P435 159 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 MRPL30Q8TCC3 161 aaKnown RBP12.29□□□□□ -0.44
VRK3-217ENST00000599538 ST8SIA2Q92186 375 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 C2orf50Q96LR7 162 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 C1orf123Q9NWV4 160 aa12.29□□□□□ -0.44
VRK3-217ENST00000599538 TRBV6-7A0A0A0MS04 114 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 LRP5LA4QPB2 252 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 ZNF44P15621 663 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 FABP6P51161 128 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 ERVK11-1P61568 191 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 TMEM187Q14656 261 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 ABCA11PQ4W5N1 156 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 FAM74A1Q5RGS3 127 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 ZNF474Q6S9Z5 364 aaPredicted RBP12.28□□□□□ -0.44
VRK3-217ENST00000599538 Q6ZS49 121 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 ZNF826PQ6ZT77 177 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 SCARB1Q8WTV0 552 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 DHRS9Q9BPW9 319 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 NAA60Q9H7X0 242 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 IGKV1D-13A0A0B4J2D9 117 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 BCL2L11O43521 198 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 IGLV1-44P01699 117 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 IGKV1-13P0DP09 117 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 GNRHRP30968 328 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 GLP1RP43220 463 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 CYCSP99999 105 aaKnown RBP12.28□□□□□ -0.44
VRK3-217ENST00000599538 KIAA2026Q5HYC2 2103 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 GGNBP1Q5YKI7 109 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 Q6ZR03 302 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 BHLHA15Q7RTS1 189 aaPredicted RBP12.28□□□□□ -0.44
VRK3-217ENST00000599538 ZGRF1Q86YA3 2104 aa12.28□□□□□ -0.44
VRK3-217ENST00000599538 FOXRED2Q8IWF2 684 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms