RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 POU3F4P49335 361 aa13.57□□□□□ -0.24
PNKP-210ENST00000597965 ADARB1P78563 741 aaKnown RBP13.57□□□□□ -0.24
PNKP-210ENST00000597965 CD69Q07108 199 aa13.57□□□□□ -0.24
PNKP-210ENST00000597965 EGFEM1PQ0D2K5 195 aa13.57□□□□□ -0.24
PNKP-210ENST00000597965 TCTEX1D4Q5JR98 221 aa13.57□□□□□ -0.24
PNKP-210ENST00000597965 TMEM244Q5VVB8 128 aa13.57□□□□□ -0.24
PNKP-210ENST00000597965 C12orf73Q69YU5 71 aa13.57□□□□□ -0.24
PNKP-210ENST00000597965 UTS2BQ765I0 119 aa13.57□□□□□ -0.24
PNKP-210ENST00000597965 BCDIN3DQ7Z5W3 292 aaKnown RBP13.57□□□□□ -0.24
PNKP-210ENST00000597965 OSR2Q8N2R0 312 aa13.57□□□□□ -0.24
PNKP-210ENST00000597965 CHST4Q8NCG5 386 aa13.57□□□□□ -0.24
PNKP-210ENST00000597965 RFKQ969G6 155 aa13.57□□□□□ -0.24
PNKP-210ENST00000597965 IL4I1Q96RQ9 567 aa13.57□□□□□ -0.24
PNKP-210ENST00000597965 TBX5Q99593 518 aa13.57□□□□□ -0.24
PNKP-210ENST00000597965 GABARAPL1Q9H0R8 117 aa13.57□□□□□ -0.24
PNKP-210ENST00000597965 SMPD3Q9NY59 655 aaPredicted RBP13.57□□□□□ -0.24
PNKP-210ENST00000597965 LOC107986453A0A1B0GWG9 222 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 BUB1B-PAK6H3BSN5 160 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 ENTPD6O75354 484 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 CSN2P05814 226 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 ZNF20P17024 532 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 BCL3P20749 454 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 LMO1P25800 156 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 HTR1FP30939 366 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 PTGFRP43088 359 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 OR3A1P47881 315 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 NPBWR2P48146 333 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 HLA-DRB5Q30154 266 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 OR10H4Q8NGA5 316 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 RDH12Q96NR8 316 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 ANKRD60Q9BZ19 345 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 HMG20AQ9NP66 347 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 INPP5EQ9NRR6 644 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 OR6C3Q9NZP0 311 aa13.56□□□□□ -0.24
PNKP-210ENST00000597965 AMMECR1Q9Y4X0 333 aaPredicted RBP13.56□□□□□ -0.24
PNKP-210ENST00000597965 A0A087X0M5 115 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 A0A1B0GX30 115 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 PSMB11A5LHX3 300 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 H3BSH0 61 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 SIRPB1O00241 398 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 OR2H2O95918 312 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 CD24P25063 80 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 DUSP1P28562 367 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 CAPGP40121 348 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 PDZK1IP1Q13113 114 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 PRAMEF5Q5TYX0 476 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 UNQ9370/PRO34162Q6UXP9 181 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 SSX6Q7RTT6 188 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 KCTD20Q7Z5Y7 419 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 DHRSXQ8N5I4 330 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 CNBD2Q96M20 576 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 WWC2-AS2Q96NR7 200 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 IL36RNQ9UBH0 155 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 HHLA2Q9UM44 414 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 GSTK1Q9Y2Q3 226 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 MOB4Q9Y3A3 225 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 HSPE1-MOB4S4R3N1 261 aa13.55□□□□□ -0.24
PNKP-210ENST00000597965 NBEAL2Q6ZNJ1 2754 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 ODAMA1E959 279 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 ZNF729A6NN14 1252 aaPredicted RBP13.54□□□□□ -0.24
PNKP-210ENST00000597965 MMP23AO75900 390 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 ISG15P05161 165 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 ATF1P18846 271 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 C9orf152Q5JTZ5 239 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 TPTE2P1Q5T6R2 138 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 KDM4DQ6B0I6 523 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 THNSL2Q86YJ6 484 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 LINC00482Q8N8I6 264 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 ZNF565Q8N9K5 539 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 OR8J1Q8NGP2 316 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 CHPT1Q8WUD6 406 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 RPEQ96AT9 228 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 OPALINQ96PE5 141 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 MYCBPQ99417 103 aaPredicted RBP13.54□□□□□ -0.24
PNKP-210ENST00000597965 B9D2Q9BPU9 175 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 COMMD4Q9H0A8 199 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 ZFP57Q9NU63 452 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 GNG8Q9UK08 70 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 KIAA2026Q5HYC2 2103 aa13.54□□□□□ -0.24
PNKP-210ENST00000597965 M0R129 80 aa13.53□□□□□ -0.24
PNKP-210ENST00000597965 ZNF44P15621 663 aa13.53□□□□□ -0.24
PNKP-210ENST00000597965 MYF6P23409 242 aa13.53□□□□□ -0.24
PNKP-210ENST00000597965 GP2P55259 537 aaKnown RBP13.53□□□□□ -0.24
PNKP-210ENST00000597965 SNU13P55769 128 aaKnown RBP13.53□□□□□ -0.24
PNKP-210ENST00000597965 KRTAP10-11P60412 298 aa13.53□□□□□ -0.24
PNKP-210ENST00000597965 SLC35B1P78383 322 aa13.53□□□□□ -0.24
PNKP-210ENST00000597965 AESQ08117 197 aa13.53□□□□□ -0.24
PNKP-210ENST00000597965 RBM39Q14498 530 aaKnown RBP13.53□□□□□ -0.24
PNKP-210ENST00000597965 ZIK1Q3SY52 487 aaPredicted RBP13.53□□□□□ -0.24
PNKP-210ENST00000597965 KRBOX4Q5JUW0 171 aa13.53□□□□□ -0.24
PNKP-210ENST00000597965 SAXO1Q8IYX7 474 aa13.53□□□□□ -0.24
PNKP-210ENST00000597965 PRSS35Q8N3Z0 413 aa13.53□□□□□ -0.24
PNKP-210ENST00000597965 COMMD1Q8N668 190 aa13.53□□□□□ -0.24
PNKP-210ENST00000597965 OR9G1Q8NH87 305 aa13.53□□□□□ -0.24
PNKP-210ENST00000597965 MBOAT4Q96T53 435 aa13.53□□□□□ -0.24
PNKP-210ENST00000597965 WI2-2373I1.2A0A1W2PRP0 233 aa13.52□□□□□ -0.25
PNKP-210ENST00000597965 KDM4BO94953 1096 aa13.52□□□□□ -0.25
PNKP-210ENST00000597965 AMY1AP04745 511 aa13.52□□□□□ -0.25
PNKP-210ENST00000597965 AMY2AP04746 511 aa13.52□□□□□ -0.25
PNKP-210ENST00000597965 OR3A4PP47883 348 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms