RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 NCBP2LA6PVI3 153 aaKnown RBP7.9□□□□□ -1.14
TRIM28-210ENST00000597618 SH2D1BO14796 132 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 OR2H2O95918 312 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 IGHG4P01861 327 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 CSN2P05814 226 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 MRPL3P09001 348 aaKnown RBP7.9□□□□□ -1.14
TRIM28-210ENST00000597618 GP9P14770 177 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 VDAC1P21796 283 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 CCL1P22362 96 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 GLIPR1P48060 266 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 NPBWR2P48146 333 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 SNU13P55769 128 aaKnown RBP7.9□□□□□ -1.14
TRIM28-210ENST00000597618 ACTR3P61158 418 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 AESQ08117 197 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 APOFQ13790 326 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 GINS1Q14691 196 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 UBE2V2Q15819 145 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 KIRREL1Q96J84 757 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 TTTY10Q9BZA0 68 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 CHST5Q9GZS9 411 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 ABCG5Q9H222 651 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 KRT84Q9NSB2 600 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 CHCHD3Q9NX63 227 aaKnown RBP7.9□□□□□ -1.14
TRIM28-210ENST00000597618 OR6C3Q9NZP0 311 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 COPS3Q9UNS2 423 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 SNX5Q9Y5X3 404 aa7.9□□□□□ -1.14
TRIM28-210ENST00000597618 KBTBD11-OT1A0A1B0GTJ5 212 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 J3QR06 171 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 SAP30O75446 220 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 SERPINA3P01011 423 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 SPNP16150 400 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 BCL3P20749 454 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 PSMB8P28062 276 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 PRDX6P30041 224 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 POU3F4P49335 361 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 RBP2P50120 134 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 CFHR3Q02985 330 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 ZNF616Q08AN1 781 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 BNIP1Q12981 228 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 GK3PQ14409 553 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 C17orf58Q2M2W7 97 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 KRBOX4Q5JUW0 171 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 UTF1Q5T230 341 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 OR2T5Q6IEZ7 315 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 ZNF322Q6U7Q0 402 aaPredicted RBP7.89□□□□□ -1.15
TRIM28-210ENST00000597618 OR1N2Q8NGR9 330 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 OR2T29Q8NH02 315 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 HAVCR2Q8TDQ0 301 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 CNN2Q99439 309 aaKnown RBP7.89□□□□□ -1.15
TRIM28-210ENST00000597618 FEVQ99581 238 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 TEX12Q9BXU0 123 aa7.89□□□□□ -1.15
TRIM28-210ENST00000597618 TRIM64CA6NLI5 447 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 SYT7O43581 403 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 MPZL2O60487 215 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 OR5H8P0DN80 308 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 CALCBP10092 127 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 ATP1B3P54709 279 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 RUNX1Q01196 453 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 EBI3Q14213 229 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 DIAPH2-AS1Q14236 149 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 ASPHD1Q5U4P2 390 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 PLEKHG7Q6ZR37 379 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 HDXQ7Z353 690 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 IZUMO1Q8IYV9 350 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 PGAM4Q8N0Y7 254 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 CHST4Q8NCG5 386 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 CCDC54Q8NEL0 328 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 DNAAF1Q8NEP3 725 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 OR6Q1Q8NGQ2 317 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 OR10X1Q8NGY0 326 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 MYOZ3Q8TDC0 251 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 COQ2Q96H96 371 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 EAF1Q96JC9 268 aaPredicted RBP7.88□□□□□ -1.15
TRIM28-210ENST00000597618 UBE2E2Q96LR5 201 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 APOL4Q9BPW4 351 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 SPATA25Q9BR10 227 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 MAGIXQ9H6Y5 334 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 HMG20AQ9NP66 347 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 ZNF580Q9UK33 172 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 GSTK1Q9Y2Q3 226 aa7.88□□□□□ -1.15
TRIM28-210ENST00000597618 KIAA2026Q5HYC2 2103 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 CCDC182A6NF36 153 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 I3L521 148 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 OVOL1O14753 267 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 HSD17B6O14756 317 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 IGHV3-7P01780 117 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 IGF1P05019 195 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 IGHV4-30-4P0DP06 118 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 ZNF44P15621 663 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 ATP6V1B2P21281 511 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 GLP1RP43220 463 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 MTCP1P56278 107 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 CXCR4P61073 352 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 CDK5Q00535 292 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 GABPB1Q06547 395 aaPredicted RBP7.87□□□□□ -1.15
TRIM28-210ENST00000597618 ZNF816Q0VGE8 651 aaPredicted RBP7.87□□□□□ -1.15
TRIM28-210ENST00000597618 ATXN7L3Q14CW9 347 aaPredicted RBP7.87□□□□□ -1.15
TRIM28-210ENST00000597618 ODF4Q2M2E3 257 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 SPATS1Q496A3 300 aa7.87□□□□□ -1.15
TRIM28-210ENST00000597618 TMEM65Q6PI78 240 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms