RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 DOC2BQ14184 412 aa12.27□□□□□ -0.45
TGFB1-202ENST00000597453 IRF3Q14653 427 aa12.27□□□□□ -0.45
TGFB1-202ENST00000597453 RBM48Q5RL73 367 aaKnown RBP12.27□□□□□ -0.45
TGFB1-202ENST00000597453 Q8IYB0 196 aa12.27□□□□□ -0.45
TGFB1-202ENST00000597453 SLAMF9Q96A28 289 aa12.27□□□□□ -0.45
TGFB1-202ENST00000597453 MTCH1Q9NZJ7 389 aa12.27□□□□□ -0.45
TGFB1-202ENST00000597453 LSM2Q9Y333 95 aaKnown RBP12.27□□□□□ -0.45
TGFB1-202ENST00000597453 DNAH3Q8TD57 4116 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 hCG_1809904A0A1W2PP81 198 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 A0A1W2PPE2 198 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 A0A1W2PR64 198 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 A0A1W2PRV1 198 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 FAM90A8PA6NJQ4 464 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 C17orf98A8MV24 154 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 RGS10O43665 173 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 ZNF737O75373 536 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 INMTO95050 263 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 HCKP08631 526 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 CELP19835 753 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 RAB3AP20336 220 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 POU3F4P49335 361 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 RPS11P62280 158 aaKnown RBP eCLIP12.26□□□□□ -0.45
TGFB1-202ENST00000597453 PDZK1IP1Q13113 114 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 SPHARQ15513 63 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 Q499Y3 187 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 PLA1AQ53H76 456 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 LDLRAD2Q5SZI1 272 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 Q6ZTK2 550 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 TCF23Q7RTU1 214 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 KLHDC1Q8N7A1 406 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 ASCC1Q8N9N2 400 aaKnown RBP12.26□□□□□ -0.45
TGFB1-202ENST00000597453 OR13C5Q8NGS8 318 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 CPNE2Q96FN4 548 aaPredicted RBP12.26□□□□□ -0.45
TGFB1-202ENST00000597453 RANBP3Q9H6Z4 567 aaPredicted RBP12.26□□□□□ -0.45
TGFB1-202ENST00000597453 TAS2R4Q9NYW5 299 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 BLOC1S6Q9UL45 172 aa12.26□□□□□ -0.45
TGFB1-202ENST00000597453 PNMA8CA0A1B0GUJ8 204 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 TMEM82A0PJX8 343 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 RAB13P51153 203 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 LGALS4P56470 323 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 PPP3R1P63098 170 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 KISS1Q15726 138 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 PRSS48Q7RTY5 328 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 SAXO1Q8IYX7 474 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 OR51A2Q8NGJ7 313 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 OR2T6Q8NHC8 308 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 CFHR4Q92496 578 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 RFT1Q96AA3 541 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 SPACA5Q96QH8 159 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 OR5M11Q96RB7 305 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 NKX3-1Q99801 234 aaPredicted RBP12.25□□□□□ -0.45
TGFB1-202ENST00000597453 RAB18Q9NP72 206 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 IL36RNQ9UBH0 155 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 NOTCH3Q9UM47 2321 aa12.25□□□□□ -0.45
TGFB1-202ENST00000597453 SMIM31A0A1B0GVY4 71 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 ODF3BA8MYP8 253 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 MAGEB3O15480 346 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 ALDOBP05062 364 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 ARG1P05089 322 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 CHRM2P08172 466 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 FSTP19883 344 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 BCL3P20749 454 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 NPBWR2P48146 333 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 EDDM3BP56851 147 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 ZP1P60852 638 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 HABP2Q14520 560 aaPredicted RBP12.24□□□□□ -0.45
TGFB1-202ENST00000597453 MED22Q15528 200 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 C11orf88Q6PI97 169 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 CCBE1Q6UXH8 406 aaPredicted RBP12.24□□□□□ -0.45
TGFB1-202ENST00000597453 LIAT1Q6ZQX7 453 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 RNF144BQ7Z419 303 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 OR5D18Q8NGL1 313 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 THRSPQ92748 146 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 EMG1Q92979 244 aaKnown RBP12.24□□□□□ -0.45
TGFB1-202ENST00000597453 NPFFR1Q9GZQ6 430 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 ZNF702PQ9H963 129 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 SEBOXQ9HB31 216 aaPredicted RBP12.24□□□□□ -0.45
TGFB1-202ENST00000597453 RHOFQ9HBH0 211 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 RBFOX1Q9NWB1 397 aaKnown RBP12.24□□□□□ -0.45
TGFB1-202ENST00000597453 TCF19Q9Y242 345 aa12.24□□□□□ -0.45
TGFB1-202ENST00000597453 TRBV5-7A0A0A0MS05 114 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 IGKV1-12A0A0C4DH73 117 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 GPX5O75715 221 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 KDM4BO94953 1096 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 IGKV1D-12P01611 117 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 ZNF728P0DKX0 622 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 IGHV1-8P0DP01 117 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 VSIG10L2P0DP72 767 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 IGFBP3P17936 291 aaPredicted RBP12.23□□□□□ -0.45
TGFB1-202ENST00000597453 FAM189A2Q15884 450 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 SSX2Q16385 188 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 ZNF626Q68DY1 528 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 GDPD3Q7L5L3 318 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 OR8H2Q8N162 312 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 FAM58AQ8N1B3 248 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 TPRX1Q8N7U7 411 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 OR13D1Q8NGV5 346 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 DERL3Q96Q80 235 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 OR14A2Q96R54 314 aa12.23□□□□□ -0.45
TGFB1-202ENST00000597453 CCDC90BQ9GZT6 254 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms