RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 ABCA7Q8IZY2 2146 aa11.44□□□□□ -0.58
VRK3-209ENST00000594948 TRAV20A0A0B4J274 112 aa11.43□□□□□ -0.58
VRK3-209ENST00000594948 A0A0J9YW62 118 aa11.43□□□□□ -0.58
VRK3-209ENST00000594948 ZNF816-ZNF321PA0A0X1KG74 233 aa11.43□□□□□ -0.58
VRK3-209ENST00000594948 B4DEV8 164 aa11.43□□□□□ -0.58
VRK3-209ENST00000594948 SCAF4O95104 1147 aaKnown RBP11.43□□□□□ -0.58
VRK3-209ENST00000594948 CLDN15P56746 228 aa11.43□□□□□ -0.58
VRK3-209ENST00000594948 RAC3P60763 192 aa11.43□□□□□ -0.58
VRK3-209ENST00000594948 PCBD1P61457 104 aa11.43□□□□□ -0.58
VRK3-209ENST00000594948 ID3Q02535 119 aa11.43□□□□□ -0.58
VRK3-209ENST00000594948 ACER2Q5QJU3 275 aa11.43□□□□□ -0.58
VRK3-209ENST00000594948 MEX3BQ6ZN04 569 aaKnown RBP11.43□□□□□ -0.58
VRK3-209ENST00000594948 Q6ZPA2 131 aa11.43□□□□□ -0.58
VRK3-209ENST00000594948 SLC35E3Q7Z769 313 aa11.43□□□□□ -0.58
VRK3-209ENST00000594948 RAB39BQ96DA2 213 aa11.43□□□□□ -0.58
VRK3-209ENST00000594948 PROK2Q9HC23 129 aa11.43□□□□□ -0.58
VRK3-209ENST00000594948 TRAV1-1A0A0B4J248 108 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 IGHV5-10-1A0A0J9YXX1 117 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 TGOLN2O43493 480 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 ZNF32P17041 273 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 UCP1P25874 307 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 GNRHRP30968 328 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 RPS10P46783 165 aaKnown RBP11.42□□□□□ -0.58
VRK3-209ENST00000594948 UBE2KP61086 200 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 TLE4Q04727 773 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 IL24Q13007 206 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 ICAM4Q14773 271 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 KHDC3LQ587J8 217 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 NMSQ5H8A3 153 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 TBC1D26Q86UD7 250 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 SAXO1Q8IYX7 474 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 M1APQ8TC57 530 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 EDARADDQ8WWZ3 215 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 SPSB4Q96A44 273 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 ZNF837Q96EG3 531 aaPredicted RBP11.42□□□□□ -0.58
VRK3-209ENST00000594948 TVP23CQ96ET8 276 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 IMMP1LQ96LU5 166 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 DUSP23Q9BVJ7 150 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 GGACTQ9BVM4 153 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 ZNF700Q9H0M5 742 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 OPA3Q9H6K4 179 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 ZNF442Q9H7R0 627 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 MRPS17Q9Y2R5 130 aaKnown RBP11.42□□□□□ -0.58
VRK3-209ENST00000594948 CDH23Q9H251 3354 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 IGHV1-45A0A0A0MS14 117 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 FAM221AA4D161 298 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 ZNF729A6NN14 1252 aaPredicted RBP11.42□□□□□ -0.58
VRK3-209ENST00000594948 PROB1E7EW31 1015 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 GPR37O15354 613 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 YKT6O15498 198 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 CBR3O75828 277 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 ZNF205O95201 554 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 SLC34A2O95436 690 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 F10P00742 488 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 VDAC1P21796 283 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 TAGLN2P37802 199 aaKnown RBP11.42□□□□□ -0.58
VRK3-209ENST00000594948 CCL20P78556 96 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 ELOBQ15370 118 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 RIPPLY2Q5TAB7 128 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 PLCXD3Q63HM9 321 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 ZNF610Q8N9Z0 462 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 TMEM171Q8WVE6 324 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 KCNE4Q8WWG9 221 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 SIGLEC12Q96PQ1 595 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 SRXN1Q9BYN0 137 aa11.42□□□□□ -0.58
VRK3-209ENST00000594948 DNAH14Q0VDD8 3507 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 ASCC3Q8N3C0 2202 aaKnown RBP11.41□□□□□ -0.58
VRK3-209ENST00000594948 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 A0A1W2PQM1 296 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 TNFSF11O14788 317 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 TUSC2O75896 110 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 DFFBO76075 338 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 CTXN2P0C2S0 81 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 CCL3P10147 92 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 FGF5P12034 268 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 SSR4P51571 173 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 DYNLT3P51808 116 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 CCL7P80098 99 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 RNPS1Q15287 305 aaKnown RBP11.41□□□□□ -0.58
VRK3-209ENST00000594948 RSPO4Q2I0M5 234 aaPredicted RBP11.41□□□□□ -0.58
VRK3-209ENST00000594948 NCMAPQ5T1S8 102 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 AKR1C8PQ5T2L2 129 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 ZNF429Q86V71 674 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 ODF3L1Q8IXM7 274 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 ZFP62Q8NB50 900 aaPredicted RBP11.41□□□□□ -0.58
VRK3-209ENST00000594948 OR5D13Q8NGL4 314 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 OR5C1Q8NGR4 320 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 AKR7LQ8NHP1 331 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 CCDC74BQ96LY2 380 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 OR2H1Q9GZK4 316 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 WNT5BQ9H1J7 359 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 Q9N2K0 584 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 GLRX2Q9NS18 164 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 PARPBPQ9NWS1 579 aa11.41□□□□□ -0.58
VRK3-209ENST00000594948 TNRC6AQ8NDV7 1962 aaKnown RBP11.41□□□□□ -0.58
VRK3-209ENST00000594948 ELOA3CA0A087WX78 387 aaPredicted RBP11.4□□□□□ -0.58
VRK3-209ENST00000594948 SEC14L6B5MCN3 397 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 SSSCA1O60232 199 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 NAPSAO96009 420 aa11.4□□□□□ -0.58
VRK3-209ENST00000594948 TK1P04183 234 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms