RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 CENPOQ9BU64 300 aa13.15□□□□□ -0.3
CIRBP-241ENST00000593048 PKIBQ9C010 78 aa13.15□□□□□ -0.3
CIRBP-241ENST00000593048 WDR12Q9GZL7 423 aaKnown RBP13.15□□□□□ -0.3
CIRBP-241ENST00000593048 MEGF9Q9H1U4 602 aa13.15□□□□□ -0.3
CIRBP-241ENST00000593048 HMG20AQ9NP66 347 aa13.15□□□□□ -0.3
CIRBP-241ENST00000593048 RAB18Q9NP72 206 aa13.15□□□□□ -0.3
CIRBP-241ENST00000593048 TXNL4BQ9NX01 149 aaKnown RBP13.15□□□□□ -0.3
CIRBP-241ENST00000593048 PEX16Q9Y5Y5 336 aa13.15□□□□□ -0.3
CIRBP-241ENST00000593048 J3QLW9 94 aa13.14□□□□□ -0.31
CIRBP-241ENST00000593048 CCL3L1P16619 93 aa13.14□□□□□ -0.31
CIRBP-241ENST00000593048 ZNF19P17023 458 aa13.14□□□□□ -0.31
CIRBP-241ENST00000593048 CCL1P22362 96 aa13.14□□□□□ -0.31
CIRBP-241ENST00000593048 MPZP25189 248 aa13.14□□□□□ -0.31
CIRBP-241ENST00000593048 COL10A1Q03692 680 aa13.14□□□□□ -0.31
CIRBP-241ENST00000593048 IL24Q13007 206 aa13.14□□□□□ -0.31
CIRBP-241ENST00000593048 Q6ZSR3 168 aa13.14□□□□□ -0.31
CIRBP-241ENST00000593048 CCDC54Q8NEL0 328 aa13.14□□□□□ -0.31
CIRBP-241ENST00000593048 AP3S1Q92572 193 aa13.14□□□□□ -0.31
CIRBP-241ENST00000593048 PLGRKTQ9HBL7 147 aa13.14□□□□□ -0.31
CIRBP-241ENST00000593048 HES4Q9HCC6 221 aa13.14□□□□□ -0.31
CIRBP-241ENST00000593048 EXOSC4Q9NPD3 245 aaKnown RBP13.14□□□□□ -0.31
CIRBP-241ENST00000593048 PNMA8CA0A1B0GUJ8 204 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 K7N7A8 449 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 ARL6IP5O75915 188 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 CHRM2P08172 466 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 PAX6P26367 422 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 MTNR1BP49286 362 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 CCR9P51686 369 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 BMXP51813 675 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 FUT6P51993 359 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 EDDM3BP56851 147 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 OR12D2P58182 307 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 LSM3P62310 102 aaKnown RBP13.13□□□□□ -0.31
CIRBP-241ENST00000593048 DCTN2Q13561 401 aaKnown RBP13.13□□□□□ -0.31
CIRBP-241ENST00000593048 ZNF273Q14593 569 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 CDK5R1Q15078 307 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 C2orf68Q2NKX9 166 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 ZNF782Q6ZMW2 699 aaPredicted RBP13.13□□□□□ -0.31
CIRBP-241ENST00000593048 Q6ZTK2 550 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 GDPD3Q7L5L3 318 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 OR4C13Q8NGP0 309 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 MCFD2Q8NI22 146 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 FAM110DQ8TAY7 271 aaPredicted RBP13.13□□□□□ -0.31
CIRBP-241ENST00000593048 BORCS5Q969J3 196 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 SLAMF9Q96A28 289 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 PELI1Q96FA3 418 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 BORCS8Q96FH0 119 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 CEP19Q96LK0 163 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 ISG20L2Q9H9L3 353 aaKnown RBP13.13□□□□□ -0.31
CIRBP-241ENST00000593048 FBLN5Q9UBX5 448 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 GNG8Q9UK08 70 aa13.13□□□□□ -0.31
CIRBP-241ENST00000593048 VWFP04275 2813 aa13.12□□□□□ -0.31
CIRBP-241ENST00000593048 NOTCH1P46531 2555 aa13.12□□□□□ -0.31
CIRBP-241ENST00000593048 SC5DO75845 299 aa13.12□□□□□ -0.31
CIRBP-241ENST00000593048 LALBAP00709 142 aa13.12□□□□□ -0.31
CIRBP-241ENST00000593048 MAPK3P27361 379 aaPredicted RBP13.12□□□□□ -0.31
CIRBP-241ENST00000593048 S100A5P33763 92 aa13.12□□□□□ -0.31
CIRBP-241ENST00000593048 ERVK11-1P61568 191 aa13.12□□□□□ -0.31
CIRBP-241ENST00000593048 ZNF846Q147U1 533 aa13.12□□□□□ -0.31
CIRBP-241ENST00000593048 UBE2V2Q15819 145 aa13.12□□□□□ -0.31
CIRBP-241ENST00000593048 AANATQ16613 207 aa13.12□□□□□ -0.31
CIRBP-241ENST00000593048 YIF1BQ5BJH7 314 aa13.12□□□□□ -0.31
CIRBP-241ENST00000593048 OR6Q1Q8NGQ2 317 aa13.12□□□□□ -0.31
CIRBP-241ENST00000593048 OR13D1Q8NGV5 346 aa13.12□□□□□ -0.31
CIRBP-241ENST00000593048 SLC25A46Q96AG3 418 aa13.12□□□□□ -0.31
CIRBP-241ENST00000593048 WNK1Q9H4A3 2382 aa13.12□□□□□ -0.31
CIRBP-241ENST00000593048 TRAV1-2A0A0B4J238 106 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 GABRPO00591 440 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 CYB5AP00167 134 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 ARG1P05089 322 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 CSF1P09603 554 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 ZNF728P0DKX0 622 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 ETV6P41212 452 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 RPS25P62851 125 aaKnown RBP13.11□□□□□ -0.31
CIRBP-241ENST00000593048 FABP5Q01469 135 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 ZNF45Q02386 682 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 CNN3Q15417 329 aaKnown RBP13.11□□□□□ -0.31
CIRBP-241ENST00000593048 TP53I3Q53FA7 332 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 PLA1AQ53H76 456 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 SLC25A26Q70HW3 274 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 C11orf42Q8N5U0 333 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 DTX3Q8N9I9 347 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 OR2T6Q8NHC8 308 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 PPP1R35Q8TAP8 253 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 ACOT12Q8WYK0 555 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 KCTD12Q96CX2 325 aaKnown RBP13.11□□□□□ -0.31
CIRBP-241ENST00000593048 AJUBAQ96IF1 538 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 PGLYRP3Q96LB9 341 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 NKX3-1Q99801 234 aaPredicted RBP13.11□□□□□ -0.31
CIRBP-241ENST00000593048 CHST5Q9GZS9 411 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 ABCB10Q9NRK6 738 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 MTCH1Q9NZJ7 389 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 SIGLEC9Q9Y336 463 aa13.11□□□□□ -0.31
CIRBP-241ENST00000593048 TRBV2A0A0J9YWF9 115 aa13.1□□□□□ -0.31
CIRBP-241ENST00000593048 LOC107986453A0A1B0GWG9 222 aa13.1□□□□□ -0.31
CIRBP-241ENST00000593048 MEX3AA1L020 520 aaKnown RBP13.1□□□□□ -0.31
CIRBP-241ENST00000593048 TMEM212A6NML5 194 aa13.1□□□□□ -0.31
CIRBP-241ENST00000593048 C17orf98A8MV24 154 aa13.1□□□□□ -0.31
CIRBP-241ENST00000593048 TSPAN15O95858 294 aa13.1□□□□□ -0.31
CIRBP-241ENST00000593048 OCM2P0CE71 109 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 194.6 ms