RNA–Protein interactions for RNA: ENST00000592594.5

TMC6-223, Transcript of transmembrane channel like 6, human

TSL 4

Gene TMC6, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMC6-223	ENST00000592594	EEF1B2	P24534	225 aa	Known RBP	13.29	□□□□□ -0.28
TMC6-223	ENST00000592594	GLIPR1	P48060	266 aa		13.29	□□□□□ -0.28
TMC6-223	ENST00000592594	P2RX3	P56373	397 aa		13.29	□□□□□ -0.28
TMC6-223	ENST00000592594	RBM11	P57052	281 aa	Known RBP	13.29	□□□□□ -0.28
TMC6-223	ENST00000592594	BPIFB3	P59826	476 aa		13.29	□□□□□ -0.28
TMC6-223	ENST00000592594	FABP5	Q01469	135 aa		13.29	□□□□□ -0.28
TMC6-223	ENST00000592594	IL13RA2	Q14627	380 aa		13.29	□□□□□ -0.28
TMC6-223	ENST00000592594	SLC9A3R2	Q15599	337 aa		13.29	□□□□□ -0.28
TMC6-223	ENST00000592594	LDLRAD2	Q5SZI1	272 aa		13.29	□□□□□ -0.28
TMC6-223	ENST00000592594	GDPD3	Q7L5L3	318 aa		13.29	□□□□□ -0.28
TMC6-223	ENST00000592594	ZNF367	Q7RTV3	350 aa		13.29	□□□□□ -0.28
TMC6-223	ENST00000592594	CEACAM19	Q7Z692	300 aa		13.29	□□□□□ -0.28
TMC6-223	ENST00000592594	OR5D13	Q8NGL4	314 aa		13.29	□□□□□ -0.28
TMC6-223	ENST00000592594	TAF15	Q92804	592 aa	Known RBP eCLIP	13.29	□□□□□ -0.28
TMC6-223	ENST00000592594	NR1H4	Q96RI1	486 aa	Predicted RBP	13.29	□□□□□ -0.28
TMC6-223	ENST00000592594	ING4	Q9UNL4	249 aa		13.29	□□□□□ -0.28
TMC6-223	ENST00000592594	HSPB6	O14558	160 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	NPFF	O15130	113 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	HOXA3	O43365	443 aa	Predicted RBP	13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	MMP23A	O75900	390 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	CSN2	P05814	226 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	MELTF	P08582	738 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	ZNF728	P0DKX0	622 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	ZNF44	P15621	663 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	MAPK3	P27361	379 aa	Predicted RBP	13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	ERP29	P30040	261 aa	Known RBP	13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	SAA4	P35542	130 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	GDNF	P39905	211 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	BMX	P51813	675 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	SCN1B	Q07699	218 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	AES	Q08117	197 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	ATXN7L3	Q14CW9	347 aa	Predicted RBP	13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	RSU1	Q15404	277 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	SLC22A6	Q4U2R8	563 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	BAIAP2L2	Q6UXY1	529 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594		Q6YL49	198 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	ZNF782	Q6ZMW2	699 aa	Predicted RBP	13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	SPART	Q8N0X7	666 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	JAGN1	Q8N5M9	183 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	TMEM104	Q8NE00	496 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	PLPPR1	Q8TBJ4	325 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	FAM216A	Q8WUB2	273 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	ZFAND2B	Q8WV99	257 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	MRPS28	Q9Y2Q9	187 aa	Known RBP	13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	LINC00312	Q9Y6C7	94 aa		13.28	□□□□□ -0.28
TMC6-223	ENST00000592594	SHISA3	A0PJX4	238 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	GEMIN2	O14893	280 aa	Known RBP	13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	DEGS1	O15121	323 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	PAX6	P26367	422 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	UBE2E1	P51965	193 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	MEF2C	Q06413	473 aa	Predicted RBP	13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	BAMBI	Q13145	260 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	UTF1	Q5T230	341 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	UBE2U	Q5VVX9	321 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	NCR3LG1	Q68D85	454 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	GLIPR1L1	Q6UWM5	242 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	LDLRAD3	Q86YD5	345 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	CDH26	Q8IXH8	852 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	OSR2	Q8N2R0	312 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	NKAIN3	Q8N8D7	197 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	CHST4	Q8NCG5	386 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	TBC1D15	Q8TC07	691 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	PHYHIP	Q92561	330 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	THRSP	Q92748	146 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	METTL9	Q9H1A3	318 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	KCNK15	Q9H427	330 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594		Q9H521	79 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	IFT22	Q9H7X7	185 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	GLS2	Q9UI32	602 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	ST3GAL6	Q9Y274	331 aa		13.27	□□□□□ -0.29
TMC6-223	ENST00000592594	CLDN34	H7C241	214 aa		13.26	□□□□□ -0.29
TMC6-223	ENST00000592594	MRPS14	O60783	128 aa	Known RBP	13.26	□□□□□ -0.29
TMC6-223	ENST00000592594	RNASE1	P07998	156 aa	Known RBP	13.26	□□□□□ -0.29
TMC6-223	ENST00000592594	IGHV1-8	P0DP01	117 aa		13.26	□□□□□ -0.29
TMC6-223	ENST00000592594	GUCA2A	Q02747	115 aa		13.26	□□□□□ -0.29
TMC6-223	ENST00000592594	HSD17B12	Q53GQ0	312 aa		13.26	□□□□□ -0.29
TMC6-223	ENST00000592594	C1orf100	Q5SVJ3	147 aa		13.26	□□□□□ -0.29
TMC6-223	ENST00000592594	RSBN1	Q5VWQ0	802 aa	Predicted RBP	13.26	□□□□□ -0.29
TMC6-223	ENST00000592594	AWAT2	Q6E213	333 aa		13.26	□□□□□ -0.29
TMC6-223	ENST00000592594	ZNF714	Q96N38	554 aa		13.26	□□□□□ -0.29
TMC6-223	ENST00000592594	JMJD8	Q96S16	334 aa		13.26	□□□□□ -0.29
TMC6-223	ENST00000592594	NDUFB11	Q9NX14	153 aa		13.26	□□□□□ -0.29
TMC6-223	ENST00000592594	hADV38S2	A0JD32	116 aa		13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	ODAM	A1E959	279 aa		13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	ODF3B	A8MYP8	253 aa		13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	TRIM77	I1YAP6	450 aa		13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	RBP4	P02753	201 aa		13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	CGB3	P0DN86	165 aa		13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	CGB7	P0DN87	165 aa		13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	SRM	P19623	302 aa		13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	COX7A1	P24310	79 aa		13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	GABRA5	P31644	462 aa		13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	PAX5	Q02548	391 aa		13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	BLMH	Q13867	455 aa		13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	TAF9	Q16594	264 aa		13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	PAN3	Q58A45	887 aa	Known RBP	13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	SIGIRR	Q6IA17	410 aa		13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	CD200R1L	Q6Q8B3	271 aa		13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	SUMF2	Q8NBJ7	301 aa		13.25	□□□□□ -0.29
TMC6-223	ENST00000592594	CORO2A	Q92828	525 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms