RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 GNMTQ14749 295 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 OR1C1Q15619 314 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 CEACAM21Q3KPI0 293 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 PIGYQ3MUY2 71 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 GGNBP1Q5YKI7 109 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 SLC25A26Q70HW3 274 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 OR5L1Q8NGL2 311 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 MICU1Q9BPX6 476 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 HDHD3Q9BSH5 251 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-206ENST00000589117 SPRY4Q9C004 299 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 RIMS4Q9H426 269 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-206ENST00000589117 ZNF703Q9H7S9 590 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-206ENST00000589117 CYTL1Q9NRR1 136 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 ZNF629Q9UEG4 869 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-206ENST00000589117 STARD10Q9Y365 291 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 TMED3Q9Y3Q3 217 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 POMT1Q9Y6A1 747 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 IGKV1D-8A0A087WSZ0 117 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 KIR2DS1A0A191URI9 304 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 C5orf49A4QMS7 147 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 F8W036 122 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 TRAPPC2LH3BP13 241 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 KCNAB3O43448 404 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 NEURL1O76050 574 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 SNAPINO95295 136 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 ACTL6AO96019 429 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 CELA3BP08861 270 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 HKR1P10072 659 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 KIR2DS4P43632 304 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 PJVKQ0ZLH3 352 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 KIR3DS1Q14943 382 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 KIR2DS1Q14954 304 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 MPV17LQ2QL34 196 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 DCAF10Q5QP82 559 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 C22orf34Q6ZV56 151 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 LINC00596Q86U02 117 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 SPACA3Q8IXA5 215 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 ZDHHC23Q8IYP9 409 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 ZNF565Q8N9K5 539 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 Q8NFD4 153 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 OR5A2Q8NGI9 324 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 ADAMTS17Q8TE56 1095 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 MOB3AQ96BX8 217 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 CALHM2Q9HA72 323 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 TREM1Q9NP99 234 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 SLC2A9Q9NRM0 540 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 SLC7A10Q9NS82 523 aa6.38□□□□□ -1.39
ZNF540-206ENST00000589117 FAM212BQ9NTI7 297 aaPredicted RBP6.38□□□□□ -1.39
ZNF540-206ENST00000589117 SPEGQ15772 3267 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 MSGN1A6NI15 193 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 C9orf172C9J069 976 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 ST8SIA3O43173 380 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 LRP3O75074 770 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 F10P00742 488 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 IGHV3-9P01782 118 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 OR5AC1P0C628 307 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 ZNF708P17019 499 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 PVALBP20472 110 aaPredicted RBP6.37□□□□□ -1.39
ZNF540-206ENST00000589117 TNFSF4P23510 183 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 LGALS4P56470 323 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 IL13RA2Q14627 380 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 SLC10A1Q14973 349 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 FAM76BQ5HYJ3 339 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 FAM122CQ6P4D5 195 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 Q6ZS49 121 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 TUSC5Q8IXB3 177 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 NAXEQ8NCW5 288 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 CPEB3Q8NE35 698 aaKnown RBP6.37□□□□□ -1.39
ZNF540-206ENST00000589117 SMIM8Q96KF7 97 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 SPIN2AQ99865 258 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 SPIN2BQ9BPZ2 258 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 SEC11CQ9BY50 192 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 TTTY12Q9BZ98 90 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 DUSP13Q9UII6 198 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 LSM5Q9Y4Y9 91 aaKnown RBP6.37□□□□□ -1.39
ZNF540-206ENST00000589117 MED12Q93074 2177 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 IGKV1-12A0A0C4DH73 117 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 PQLC2LA1A4F0 135 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 PINLYPA6NC86 204 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 ANKRD30BLA7E2S9 258 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 IGKV1D-12P01611 117 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 FAM157CP0CG43 387 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 APLNRP35414 380 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 HAAOP46952 286 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 SULT1A2P50226 295 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 RAB5CP51148 216 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 CAV2P51636 162 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 F2RL1P55085 397 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 CLDN18P56856 261 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 TMEM33P57088 247 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 FGF12P61328 243 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 RAB1AP62820 205 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 PRDX4Q13162 271 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 MRPL49Q13405 166 aaKnown RBP6.37□□□□□ -1.39
ZNF540-206ENST00000589117 TMEM187Q14656 261 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 ZNF169Q14929 603 aaPredicted RBP6.37□□□□□ -1.39
ZNF540-206ENST00000589117 TCEAL6Q6IPX3 200 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 FBXW12Q6X9E4 464 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 DTX1Q86Y01 620 aa6.37□□□□□ -1.39
ZNF540-206ENST00000589117 ZNF573Q86YE8 665 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms