RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 DUX4L6P0CJ89 424 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 DUX4L7P0CJ90 424 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 RPS19P39019 145 aaKnown RBP16.22■□□□□ 0.19
CIRBP-220ENST00000588917 SCAND1P57086 179 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 VBP1P61758 197 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 RPS27AP62979 156 aaKnown RBP16.22■□□□□ 0.19
CIRBP-220ENST00000588917 QRFPP83859 136 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 RBM39Q14498 530 aaKnown RBP16.22■□□□□ 0.19
CIRBP-220ENST00000588917 GRK1Q15835 563 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 TAF9Q16594 264 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 CTF1Q16619 201 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 DUX4L9Q6RFH8 374 aaPredicted RBP16.22■□□□□ 0.19
CIRBP-220ENST00000588917 C17orf107Q6ZR85 190 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 USP43Q70EL4 1123 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 PRIMA1Q86XR5 153 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 TMEM104Q8NE00 496 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 H1FXQ92522 213 aaKnown RBP16.22■□□□□ 0.19
CIRBP-220ENST00000588917 FAM46BQ96A09 425 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 PTX4Q96A99 478 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 Q96M66 194 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 DCTN5Q9BTE1 182 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 BARHL1Q9BZE3 327 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 SHARPINQ9H0F6 387 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 LIN7BQ9HAP6 207 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 DUX4Q9UBX2 424 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 LPAR3Q9UBY5 353 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 DAPK2Q9UIK4 370 aa16.22■□□□□ 0.19
CIRBP-220ENST00000588917 RPUSD1Q9UJJ7 312 aaKnown RBP16.22■□□□□ 0.19
CIRBP-220ENST00000588917 TMEM82A0PJX8 343 aa16.21■□□□□ 0.19
CIRBP-220ENST00000588917 A8MV72 311 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-220ENST00000588917 SLC33A1O00400 549 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-220ENST00000588917 CSN2P05814 226 aa16.21■□□□□ 0.19
CIRBP-220ENST00000588917 SELLP14151 372 aa16.21■□□□□ 0.19
CIRBP-220ENST00000588917 ZNF16P17020 682 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-220ENST00000588917 ERP29P30040 261 aaKnown RBP16.21■□□□□ 0.19
CIRBP-220ENST00000588917 SERPINB10P48595 397 aa16.21■□□□□ 0.19
CIRBP-220ENST00000588917 CLDN12P56749 244 aa16.21■□□□□ 0.19
CIRBP-220ENST00000588917 NCS1P62166 190 aa16.21■□□□□ 0.19
CIRBP-220ENST00000588917 ATAD3CQ5T2N8 411 aa16.21■□□□□ 0.19
CIRBP-220ENST00000588917 FAHD2BQ6P2I3 314 aaPredicted RBP16.21■□□□□ 0.19
CIRBP-220ENST00000588917 NR2C2APQ86WQ0 139 aa16.21■□□□□ 0.19
CIRBP-220ENST00000588917 TEX29Q8N6K0 151 aa16.21■□□□□ 0.19
CIRBP-220ENST00000588917 LY6G5BQ8NDX9 201 aa16.21■□□□□ 0.19
CIRBP-220ENST00000588917 C8orf46Q8TAG6 207 aa16.21■□□□□ 0.19
CIRBP-220ENST00000588917 FAHD2AQ96GK7 314 aa16.21■□□□□ 0.19
CIRBP-220ENST00000588917 NUDT16L1Q9BRJ7 211 aaKnown RBP16.21■□□□□ 0.19
CIRBP-220ENST00000588917 TM2D1Q9BX74 207 aa16.21■□□□□ 0.19
CIRBP-220ENST00000588917 YAE1D1Q9NRH1 226 aa16.21■□□□□ 0.19
CIRBP-220ENST00000588917 IGHV2-70DA0A0C4DH43 119 aa16.2■□□□□ 0.18
CIRBP-220ENST00000588917 METTL21EPA6NDL7 271 aa16.2■□□□□ 0.18
CIRBP-220ENST00000588917 MCRIP1C9JLW8 97 aa16.2■□□□□ 0.18
CIRBP-220ENST00000588917 PSPNO60542 156 aa16.2■□□□□ 0.18
CIRBP-220ENST00000588917 CLEC2LP0C7M8 214 aa16.2■□□□□ 0.18
CIRBP-220ENST00000588917 PPIAL4GP0DN37 164 aa16.2■□□□□ 0.18
CIRBP-220ENST00000588917 RAB6AP20340 208 aa16.2■□□□□ 0.18
CIRBP-220ENST00000588917 FUT3P21217 361 aa16.2■□□□□ 0.18
CIRBP-220ENST00000588917 PAX2Q02962 417 aa16.2■□□□□ 0.18
CIRBP-220ENST00000588917 MEF2CQ06413 473 aaPredicted RBP16.2■□□□□ 0.18
CIRBP-220ENST00000588917 KRTAP1-1Q07627 177 aa16.2■□□□□ 0.18
CIRBP-220ENST00000588917 PDCD1Q15116 288 aa16.2■□□□□ 0.18
CIRBP-220ENST00000588917 PAN3Q58A45 887 aaKnown RBP16.2■□□□□ 0.18
CIRBP-220ENST00000588917 OR10K2Q6IF99 312 aa16.2■□□□□ 0.18
CIRBP-220ENST00000588917 TMEM160Q9NX00 188 aa16.2■□□□□ 0.18
CIRBP-220ENST00000588917 ABRACLQ9P1F3 81 aa16.2■□□□□ 0.18
CIRBP-220ENST00000588917 INSIG2Q9Y5U4 225 aa16.2■□□□□ 0.18
CIRBP-220ENST00000588917 CR1P17927 2039 aa16.19■□□□□ 0.18
CIRBP-220ENST00000588917 SMIM30A4D0T7 59 aa16.19■□□□□ 0.18
CIRBP-220ENST00000588917 LDLRAD4O15165 306 aa16.19■□□□□ 0.18
CIRBP-220ENST00000588917 SLC2A2P11168 524 aaPredicted RBP16.19■□□□□ 0.18
CIRBP-220ENST00000588917 TGFBR1P36897 503 aa16.19■□□□□ 0.18
CIRBP-220ENST00000588917 RORCP51449 518 aa16.19■□□□□ 0.18
CIRBP-220ENST00000588917 RPL31P62899 125 aaKnown RBP16.19■□□□□ 0.18
CIRBP-220ENST00000588917 UNC119Q13432 240 aa16.19■□□□□ 0.18
CIRBP-220ENST00000588917 IDNKQ5T6J7 187 aa16.19■□□□□ 0.18
CIRBP-220ENST00000588917 FAM89BQ8N5H3 189 aa16.19■□□□□ 0.18
CIRBP-220ENST00000588917 SUMF2Q8NBJ7 301 aa16.19■□□□□ 0.18
CIRBP-220ENST00000588917 OR4S1Q8NGB4 309 aa16.19■□□□□ 0.18
CIRBP-220ENST00000588917 SLC25A46Q96AG3 418 aa16.19■□□□□ 0.18
CIRBP-220ENST00000588917 NEDD4LQ96PU5 975 aa16.19■□□□□ 0.18
CIRBP-220ENST00000588917 DPCDQ9BVM2 203 aaPredicted RBP16.19■□□□□ 0.18
CIRBP-220ENST00000588917 CHST6Q9GZX3 395 aa16.19■□□□□ 0.18
CIRBP-220ENST00000588917 NAA50Q9GZZ1 169 aaKnown RBP16.19■□□□□ 0.18
CIRBP-220ENST00000588917 MMP26Q9NRE1 261 aa16.19■□□□□ 0.18
CIRBP-220ENST00000588917 TRAV24A0A0B4J272 114 aa16.18■□□□□ 0.18
CIRBP-220ENST00000588917 TMEM272A0A1B0GTI8 110 aa16.18■□□□□ 0.18
CIRBP-220ENST00000588917 A0A1W2PQ09 198 aa16.18■□□□□ 0.18
CIRBP-220ENST00000588917 hADV38S2A0JD32 116 aa16.18■□□□□ 0.18
CIRBP-220ENST00000588917 FCN3O75636 299 aa16.18■□□□□ 0.18
CIRBP-220ENST00000588917 OR3A1P47881 315 aa16.18■□□□□ 0.18
CIRBP-220ENST00000588917 EDDM3BP56851 147 aa16.18■□□□□ 0.18
CIRBP-220ENST00000588917 PAX8Q06710 450 aa16.18■□□□□ 0.18
CIRBP-220ENST00000588917 BLMHQ13867 455 aa16.18■□□□□ 0.18
CIRBP-220ENST00000588917 CMTM4Q8IZR5 234 aa16.18■□□□□ 0.18
CIRBP-220ENST00000588917 OR56B1Q8NGI3 324 aa16.18■□□□□ 0.18
CIRBP-220ENST00000588917 DACT3Q96B18 629 aaPredicted RBP16.18■□□□□ 0.18
CIRBP-220ENST00000588917 KCTD12Q96CX2 325 aaKnown RBP16.18■□□□□ 0.18
CIRBP-220ENST00000588917 LPAR5Q9H1C0 372 aa16.18■□□□□ 0.18
CIRBP-220ENST00000588917 DCSTAMPQ9H295 470 aa16.18■□□□□ 0.18
CIRBP-220ENST00000588917 NCOR1P1Q9H4R4 102 aa16.18■□□□□ 0.18
CIRBP-220ENST00000588917 C7orf69Q9H7B7 122 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms