RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 C4orf26Q17RF5 130 aa4.95□□□□□ -1.62
VMP1-208ENST00000588617 RIBC1Q8N443 379 aaPredicted RBP4.95□□□□□ -1.62
VMP1-208ENST00000588617 OR10G2Q8NGC3 310 aa4.95□□□□□ -1.62
VMP1-208ENST00000588617 OR4P4Q8NGL7 312 aa4.95□□□□□ -1.62
VMP1-208ENST00000588617 ZNF461Q8TAF7 563 aa4.95□□□□□ -1.62
VMP1-208ENST00000588617 CASTOR1Q8WTX7 329 aa4.95□□□□□ -1.62
VMP1-208ENST00000588617 PPP1R14BQ96C90 147 aa4.95□□□□□ -1.62
VMP1-208ENST00000588617 FXYD5Q96DB9 178 aa4.95□□□□□ -1.62
VMP1-208ENST00000588617 SMIM12Q96EX1 92 aa4.95□□□□□ -1.62
VMP1-208ENST00000588617 KCTD7Q96MP8 289 aa4.95□□□□□ -1.62
VMP1-208ENST00000588617 YPEL4Q96NS1 127 aa4.95□□□□□ -1.62
VMP1-208ENST00000588617 DERL3Q96Q80 235 aa4.95□□□□□ -1.62
VMP1-208ENST00000588617 MARVELD1Q9BSK0 173 aa4.95□□□□□ -1.62
VMP1-208ENST00000588617 TSGA10Q9BZW7 698 aa4.95□□□□□ -1.62
VMP1-208ENST00000588617 FAM206AQ9NX38 181 aa4.95□□□□□ -1.62
VMP1-208ENST00000588617 HMGXB4Q9UGU5 601 aa4.95□□□□□ -1.62
VMP1-208ENST00000588617 ZNF706Q9Y5V0 76 aaPredicted RBP4.95□□□□□ -1.62
VMP1-208ENST00000588617 IGKV1-6A0A0C4DH72 117 aa4.94□□□□□ -1.62
VMP1-208ENST00000588617 TINCRA0A1B0GVN0 87 aa4.94□□□□□ -1.62
VMP1-208ENST00000588617 SLC37A4O43826 429 aa4.94□□□□□ -1.62
VMP1-208ENST00000588617 IMPA1P29218 277 aa4.94□□□□□ -1.62
VMP1-208ENST00000588617 RGS21Q2M5E4 152 aa4.94□□□□□ -1.62
VMP1-208ENST00000588617 LUZP6Q538Z0 58 aa4.94□□□□□ -1.62
VMP1-208ENST00000588617 NXNL2Q5VZ03 156 aa4.94□□□□□ -1.62
VMP1-208ENST00000588617 Q6ZR03 302 aa4.94□□□□□ -1.62
VMP1-208ENST00000588617 MBOAT7Q96N66 472 aa4.94□□□□□ -1.62
VMP1-208ENST00000588617 SND1-IT1Q9HBX3 110 aa4.94□□□□□ -1.62
VMP1-208ENST00000588617 FBXO6Q9NRD1 293 aaPredicted RBP4.94□□□□□ -1.62
VMP1-208ENST00000588617 TBL2Q9Y4P3 447 aaKnown RBP4.94□□□□□ -1.62
VMP1-208ENST00000588617 ZNF646O15015 1829 aaPredicted RBP4.94□□□□□ -1.62
VMP1-208ENST00000588617 DYSFO75923 2080 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 SMIM23A6NLE4 172 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 C9JQL5 133 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 C8orf87E5RJ46 101 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 F5H5T6 163 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 SSNA1O43805 119 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 CYB5R3P00387 301 aaPredicted RBP4.93□□□□□ -1.62
VMP1-208ENST00000588617 SOD3P08294 240 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 SEC11BP0C7V7 166 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 SCGB1C2P0DMR2 95 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 CLEC12BQ2HXU8 276 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 OGFRL1Q5TC84 451 aaPredicted RBP4.93□□□□□ -1.62
VMP1-208ENST00000588617 GLYATQ6IB77 296 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 KRTAP5-11Q6L8G4 156 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 NANOGP8Q6NSW7 305 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 FA2HQ7L5A8 372 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 MUC15Q8N387 334 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 OR2Z1Q8NG97 314 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 OR52E4Q8NGH9 312 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 SCGB1C1Q8TD33 95 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 SLC25A46Q96AG3 418 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 RNF157Q96PX1 679 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 TMEM208Q9BTX3 173 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 ULBP1Q9BZM6 244 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 ZNF436Q9C0F3 470 aaPredicted RBP4.93□□□□□ -1.62
VMP1-208ENST00000588617 TP53TG1Q9Y2A0 90 aa4.93□□□□□ -1.62
VMP1-208ENST00000588617 CENPVL3A0A0U1RRI6 287 aa4.92□□□□□ -1.62
VMP1-208ENST00000588617 A8MWL6 223 aa4.92□□□□□ -1.62
VMP1-208ENST00000588617 LRRN3E7EW58 273 aa4.92□□□□□ -1.62
VMP1-208ENST00000588617 CNMDO75829 334 aa4.92□□□□□ -1.62
VMP1-208ENST00000588617 ADORA1P30542 326 aa4.92□□□□□ -1.62
VMP1-208ENST00000588617 ATP5G2Q06055 141 aa4.92□□□□□ -1.62
VMP1-208ENST00000588617 GOLGA7BQ2TAP0 167 aa4.92□□□□□ -1.62
VMP1-208ENST00000588617 LINC00303Q3SY05 128 aa4.92□□□□□ -1.62
VMP1-208ENST00000588617 OLIG3Q7RTU3 272 aa4.92□□□□□ -1.62
VMP1-208ENST00000588617 ZDHHC22Q8N966 263 aa4.92□□□□□ -1.62
VMP1-208ENST00000588617 ZNF555Q8NEP9 628 aa4.92□□□□□ -1.62
VMP1-208ENST00000588617 IGHV2-26A0A0B4J1V2 119 aa4.91□□□□□ -1.62
VMP1-208ENST00000588617 METTL15A6NJ78 407 aa4.91□□□□□ -1.62
VMP1-208ENST00000588617 LGALS9O00182 355 aa4.91□□□□□ -1.62
VMP1-208ENST00000588617 PFDN6O15212 129 aa4.91□□□□□ -1.62
VMP1-208ENST00000588617 CD74P04233 296 aa4.91□□□□□ -1.62
VMP1-208ENST00000588617 IFNGR2P38484 337 aa4.91□□□□□ -1.62
VMP1-208ENST00000588617 MORN3Q6PF18 240 aaPredicted RBP4.91□□□□□ -1.62
VMP1-208ENST00000588617 Q8N402 240 aa4.91□□□□□ -1.62
VMP1-208ENST00000588617 OR5H2Q8NGV7 314 aa4.91□□□□□ -1.62
VMP1-208ENST00000588617 ERMNQ8TAM6 284 aa4.91□□□□□ -1.62
VMP1-208ENST00000588617 SRSF12Q8WXF0 261 aaKnown RBP4.91□□□□□ -1.62
VMP1-208ENST00000588617 L3HYPDHQ96EM0 354 aa4.91□□□□□ -1.62
VMP1-208ENST00000588617 GPR82Q96P67 336 aa4.91□□□□□ -1.62
VMP1-208ENST00000588617 TAC3Q9UHF0 121 aa4.91□□□□□ -1.62
VMP1-208ENST00000588617 C14orf166Q9Y224 244 aaKnown RBP4.91□□□□□ -1.62
VMP1-208ENST00000588617 SNX10Q9Y5X0 201 aa4.91□□□□□ -1.62
VMP1-208ENST00000588617 IGSF9BQ9UPX0 1349 aa4.91□□□□□ -1.62
VMP1-208ENST00000588617 LAMC3Q9Y6N6 1575 aa4.91□□□□□ -1.62
VMP1-208ENST00000588617 TOP2BQ02880 1626 aa4.9□□□□□ -1.62
VMP1-208ENST00000588617 PLB1Q6P1J6 1458 aa4.9□□□□□ -1.62
VMP1-208ENST00000588617 AZIN1O14977 448 aa4.9□□□□□ -1.63
VMP1-208ENST00000588617 RGS5O15539 181 aa4.9□□□□□ -1.63
VMP1-208ENST00000588617 EPPINO95925 133 aa4.9□□□□□ -1.63
VMP1-208ENST00000588617 CCNE2O96020 404 aa4.9□□□□□ -1.63
VMP1-208ENST00000588617 KRTAP1-4P0C5Y4 121 aa4.9□□□□□ -1.63
VMP1-208ENST00000588617 NQO1P15559 274 aaKnown RBP4.9□□□□□ -1.63
VMP1-208ENST00000588617 NELFEP18615 380 aaKnown RBP4.9□□□□□ -1.63
VMP1-208ENST00000588617 ELK4P28324 431 aa4.9□□□□□ -1.63
VMP1-208ENST00000588617 HAAOP46952 286 aa4.9□□□□□ -1.63
VMP1-208ENST00000588617 MGAT3Q09327 533 aa4.9□□□□□ -1.63
VMP1-208ENST00000588617 SMAGPQ0VAQ4 97 aa4.9□□□□□ -1.63
VMP1-208ENST00000588617 TTMPQ5BVD1 217 aa4.9□□□□□ -1.63
VMP1-208ENST00000588617 ZFP2Q6ZN57 461 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms