RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 DLX6P56179 175 aa16.57■□□□□ 0.24
DDX39A-207ENST00000588542 PRB3Q04118 309 aaPredicted RBP16.57■□□□□ 0.24
DDX39A-207ENST00000588542 GPR176Q14439 515 aa16.57■□□□□ 0.24
DDX39A-207ENST00000588542 SYT6Q5T7P8 510 aaPredicted RBP16.57■□□□□ 0.24
DDX39A-207ENST00000588542 GPR157Q5UAW9 335 aa16.57■□□□□ 0.24
DDX39A-207ENST00000588542 GLT8D1Q68CQ7 371 aa16.57■□□□□ 0.24
DDX39A-207ENST00000588542 BRD3OSQ6XYD6 125 aa16.57■□□□□ 0.24
DDX39A-207ENST00000588542 C9orf139Q6ZV77 190 aa16.57■□□□□ 0.24
DDX39A-207ENST00000588542 PPP1R35Q8TAP8 253 aa16.57■□□□□ 0.24
DDX39A-207ENST00000588542 FOXRED1Q96CU9 486 aaPredicted RBP16.57■□□□□ 0.24
DDX39A-207ENST00000588542 SLITRK2Q9H156 845 aa16.57■□□□□ 0.24
DDX39A-207ENST00000588542 OCEL1Q9H607 264 aa16.57■□□□□ 0.24
DDX39A-207ENST00000588542 MEX3AA1L020 520 aaKnown RBP16.56■□□□□ 0.24
DDX39A-207ENST00000588542 GEMIN2O14893 280 aaKnown RBP16.56■□□□□ 0.24
DDX39A-207ENST00000588542 CSN2P05814 226 aa16.56■□□□□ 0.24
DDX39A-207ENST00000588542 GTF2F2P13984 249 aa16.56■□□□□ 0.24
DDX39A-207ENST00000588542 GALP22466 123 aa16.56■□□□□ 0.24
DDX39A-207ENST00000588542 FPR2P25090 351 aa16.56■□□□□ 0.24
DDX39A-207ENST00000588542 MEF2CQ06413 473 aaPredicted RBP16.56■□□□□ 0.24
DDX39A-207ENST00000588542 RUSC1-AS1Q66K80 236 aa16.56■□□□□ 0.24
DDX39A-207ENST00000588542 METAP1DQ6UB28 335 aaPredicted RBP16.56■□□□□ 0.24
DDX39A-207ENST00000588542 TMEM104Q8NE00 496 aa16.56■□□□□ 0.24
DDX39A-207ENST00000588542 MS4A7Q9GZW8 240 aaPredicted RBP16.56■□□□□ 0.24
DDX39A-207ENST00000588542 ZNF696Q9H7X3 374 aa16.56■□□□□ 0.24
DDX39A-207ENST00000588542 IFT22Q9H7X7 185 aa16.56■□□□□ 0.24
DDX39A-207ENST00000588542 PCDHB16Q9NRJ7 776 aa16.56■□□□□ 0.24
DDX39A-207ENST00000588542 AK6Q9Y3D8 172 aaKnown RBP16.56■□□□□ 0.24
DDX39A-207ENST00000588542 IGHV1-69DA0A0B4J2H0 117 aa16.55■□□□□ 0.24
DDX39A-207ENST00000588542 SHISA3A0PJX4 238 aa16.55■□□□□ 0.24
DDX39A-207ENST00000588542 RNASEK-C17orf49H0YIS7 233 aa16.55■□□□□ 0.24
DDX39A-207ENST00000588542 SLC22A1O15245 554 aa16.55■□□□□ 0.24
DDX39A-207ENST00000588542 IGHV1-69P01742 117 aa16.55■□□□□ 0.24
DDX39A-207ENST00000588542 PRTN3P24158 256 aa16.55■□□□□ 0.24
DDX39A-207ENST00000588542 P2RX3P56373 397 aa16.55■□□□□ 0.24
DDX39A-207ENST00000588542 ERVFRD-1P60508 538 aa16.55■□□□□ 0.24
DDX39A-207ENST00000588542 SRSF2Q01130 221 aaKnown RBP16.55■□□□□ 0.24
DDX39A-207ENST00000588542 AESQ08117 197 aa16.55■□□□□ 0.24
DDX39A-207ENST00000588542 KLRD1Q13241 179 aa16.55■□□□□ 0.24
DDX39A-207ENST00000588542 NEDD8Q15843 81 aa16.55■□□□□ 0.24
DDX39A-207ENST00000588542 BPIFB2Q8N4F0 458 aa16.55■□□□□ 0.24
DDX39A-207ENST00000588542 TSPAN14Q8NG11 270 aa16.55■□□□□ 0.24
DDX39A-207ENST00000588542 SLC25A28Q96A46 364 aa16.55■□□□□ 0.24
DDX39A-207ENST00000588542 MRPS24Q96EL2 167 aaKnown RBP16.55■□□□□ 0.24
DDX39A-207ENST00000588542 COQ2Q96H96 371 aa16.55■□□□□ 0.24
DDX39A-207ENST00000588542 ZNF48Q96MX3 618 aaPredicted RBP16.55■□□□□ 0.24
DDX39A-207ENST00000588542 BANF2Q9H503 90 aa16.55■□□□□ 0.24
DDX39A-207ENST00000588542 METTL8Q9H825 291 aaKnown RBP16.55■□□□□ 0.24
DDX39A-207ENST00000588542 A0A1W2PPH5 198 aa16.54■□□□□ 0.24
DDX39A-207ENST00000588542 C17orf98A8MV24 154 aa16.54■□□□□ 0.24
DDX39A-207ENST00000588542 TCF21O43680 179 aa16.54■□□□□ 0.24
DDX39A-207ENST00000588542 GLIPR1P48060 266 aa16.54■□□□□ 0.24
DDX39A-207ENST00000588542 BPIFB3P59826 476 aa16.54■□□□□ 0.24
DDX39A-207ENST00000588542 BLMHQ13867 455 aa16.54■□□□□ 0.24
DDX39A-207ENST00000588542 ATXN7L3Q14CW9 347 aaPredicted RBP16.54■□□□□ 0.24
DDX39A-207ENST00000588542 PAN3Q58A45 887 aaKnown RBP16.54■□□□□ 0.24
DDX39A-207ENST00000588542 HCP5Q6MZN7 132 aa16.54■□□□□ 0.24
DDX39A-207ENST00000588542 USP43Q70EL4 1123 aa16.54■□□□□ 0.24
DDX39A-207ENST00000588542 LINC00596Q86U02 117 aa16.54■□□□□ 0.24
DDX39A-207ENST00000588542 PDZD9Q8IXQ8 264 aa16.54■□□□□ 0.24
DDX39A-207ENST00000588542 GHRLQ9UBU3 117 aa16.54■□□□□ 0.24
DDX39A-207ENST00000588542 LINC00312Q9Y6C7 94 aa16.54■□□□□ 0.24
DDX39A-207ENST00000588542 A0A087WXM4 84 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 TRAV1-2A0A0B4J238 106 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 hADV38S2A0JD32 116 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 TRIM64CA6NLI5 447 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 HSPB6O14558 160 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 OR7C1O76099 320 aaPredicted RBP16.53■□□□□ 0.24
DDX39A-207ENST00000588542 VENTXO95231 258 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 ZNF728P0DKX0 622 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 MGMTP16455 207 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 HTR2CP28335 458 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 TAF9Q16594 264 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 MPV17LQ2QL34 196 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 C22orf42Q6IC83 251 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 SIGLECL1Q8N7X8 197 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 SUMF2Q8NBJ7 301 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 OR6M1Q8NGM8 313 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 ZNF418Q8TF45 676 aaPredicted RBP16.53■□□□□ 0.24
DDX39A-207ENST00000588542 Q96M66 194 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 SUCNR1Q9BXA5 334 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 STUB1Q9UNE7 303 aa16.53■□□□□ 0.24
DDX39A-207ENST00000588542 A0A0A6YYJ9 748 aa16.52■□□□□ 0.24
DDX39A-207ENST00000588542 SLC17A2O00624 439 aa16.52■□□□□ 0.24
DDX39A-207ENST00000588542 CRTAPO75718 401 aaPredicted RBP16.52■□□□□ 0.24
DDX39A-207ENST00000588542 UBBP0CG47 229 aa16.52■□□□□ 0.24
DDX39A-207ENST00000588542 VSIG8P0DPA2 414 aa16.52■□□□□ 0.24
DDX39A-207ENST00000588542 FGF9P31371 208 aaPredicted RBP16.52■□□□□ 0.24
DDX39A-207ENST00000588542 HILS1P60008 231 aa16.52■□□□□ 0.24
DDX39A-207ENST00000588542 QRFPP83859 136 aa16.52■□□□□ 0.24
DDX39A-207ENST00000588542 KRBOX4Q5JUW0 171 aa16.52■□□□□ 0.24
DDX39A-207ENST00000588542 OR10K2Q6IF99 312 aa16.52■□□□□ 0.24
DDX39A-207ENST00000588542 PIP4P2Q8N4L2 257 aa16.52■□□□□ 0.24
DDX39A-207ENST00000588542 PLPPR1Q8TBJ4 325 aa16.52■□□□□ 0.24
DDX39A-207ENST00000588542 CORO2AQ92828 525 aa16.52■□□□□ 0.24
DDX39A-207ENST00000588542 DPCDQ9BVM2 203 aaPredicted RBP16.52■□□□□ 0.24
DDX39A-207ENST00000588542 SELENOIQ9C0D9 397 aa16.52■□□□□ 0.24
DDX39A-207ENST00000588542 KCNK15Q9H427 330 aa16.52■□□□□ 0.24
DDX39A-207ENST00000588542 TXNL4BQ9NX01 149 aaKnown RBP16.52■□□□□ 0.24
DDX39A-207ENST00000588542 MDFIC2A0A1B0GVS7 189 aa16.51■□□□□ 0.23
DDX39A-207ENST00000588542 ODAMA1E959 279 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms