RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	MLX	Q9UH92	298 aa		12.15	□□□□□ -0.46
NEDD4L-223	ENST00000588516	NOSIP	Q9Y314	301 aa	Known RBP	12.15	□□□□□ -0.46
NEDD4L-223	ENST00000588516	PRELID3B	Q9Y3B1	194 aa		12.15	□□□□□ -0.46
NEDD4L-223	ENST00000588516	C5orf63	A6NC05	138 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	MSGN1	A6NI15	193 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516		G3V3Y1	287 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	SPRY1	O43609	319 aa	Predicted RBP	12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	FBXO24	O75426	580 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	MMP9	P14780	707 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	B4GALT1	P15291	398 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	RND3	P61587	244 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	RPL7L1	Q6DKI1	246 aa	Known RBP	12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	SLC22A25	Q6T423	547 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ATRAID	Q6UW56	229 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	BTNL8	Q6UX41	500 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	RTN4RL2	Q86UN3	420 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	OR10AD1	Q8NGE0	317 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	OR2AE1	Q8NHA4	323 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	AKR7L	Q8NHP1	331 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	PIGC	Q92535	297 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	C18orf12	Q96KH6	178 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	IP6K3	Q96PC2	410 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	NRIP2	Q9BQI9	281 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	SULT4A1	Q9BR01	284 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	PBDC1	Q9BVG4	233 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	GPR87	Q9BY21	358 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	SLC25A31	Q9H0C2	315 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	HRH4	Q9H3N8	390 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	FBXL17	Q9UF56	701 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	LSM5	Q9Y4Y9	91 aa	Known RBP	12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	COL12A1	Q99715	3063 aa		12.14	□□□□□ -0.47
NEDD4L-223	ENST00000588516	PMS2P1	A4D2B8	440 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	LRP5L	A4QPB2	252 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ZNF724	A8MTY0	619 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ZNF587B	E7ETH6	402 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ANGPTL7	O43827	346 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	TSPAN15	O95858	294 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	MT-CO3	P00414	261 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	TK1	P04183	234 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	TMEM33	P57088	247 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	PLP2	Q04941	152 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	MST1L	Q2TV78	715 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	FBXW12	Q6X9E4	464 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	COLCA1	Q6ZS62	124 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	PUSL1	Q8N0Z8	303 aa	Known RBP	12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ZNF565	Q8N9K5	539 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ROBO4	Q8WZ75	1007 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	TOMM40L	Q969M1	308 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	MRPL24	Q96A35	216 aa	Known RBP	12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	APOBEC3D	Q96AK3	386 aa	Predicted RBP	12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	GINS3	Q9BRX5	216 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	SLC2A9	Q9NRM0	540 aa		12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	RCC2	Q9P258	522 aa	Known RBP	12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	SPTAN1	Q13813	2472 aa	Known RBP	12.13	□□□□□ -0.47
NEDD4L-223	ENST00000588516	LRRC3C	A6NJW4	275 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	C21orf140	B9A014	251 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	GEMIN2	O14893	280 aa	Known RBP	12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	NUPL2	O15504	423 aa	Known RBP	12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ACTL6A	O96019	429 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	CD5	P06127	495 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	MMP7	P09237	267 aa	Predicted RBP	12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	PAX6	P26367	422 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	GFRA1	P56159	465 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ZNF266	Q14584	549 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	WIPI1	Q5MNZ9	446 aa	Predicted RBP	12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	TMEM164	Q5U3C3	297 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ABHD17B	Q5VST6	288 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	FOXRED2	Q8IWF2	684 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	OR10Z1	Q8NGY1	313 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	LYPD6B	Q8NI32	183 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	CT55	Q8WUE5	264 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	IL22RA2	Q969J5	263 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	MARS2	Q96GW9	593 aa	Known RBP	12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	SMCO4	Q9NRQ5	59 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	LOXL2	Q9Y4K0	774 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	NOTCH2	Q04721	2471 aa		12.12	□□□□□ -0.47
NEDD4L-223	ENST00000588516	IGKV1-27	A0A075B6S5	117 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	IGKV1D-8	A0A087WSZ0	117 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	FAM74A7	A6NL05	159 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	UMAD1	C9J7I0	102 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	HSPA12A	O43301	675 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	SCGB1D2	O95969	90 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	OR5AC1	P0C628	307 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	OPRM1	P35372	400 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ZNF92	Q03936	586 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	RNPS1	Q15287	305 aa	Known RBP	12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	CEACAM21	Q3KPI0	293 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	FAM74A3	Q4VXF1	159 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	C4orf17	Q53FE4	359 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ZNF468	Q5VIY5	522 aa	Predicted RBP	12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	MRPL21	Q7Z2W9	205 aa	Known RBP	12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	LDLRAD3	Q86YD5	345 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ZDHHC23	Q8IYP9	409 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	OR8G5	Q8NG78	346 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	OR5A2	Q8NGI9	324 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	OR5L1	Q8NGL2	311 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	OR4A4P	Q8NGN8	299 aa		12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ZNF837	Q96EG3	531 aa	Predicted RBP	12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	ALKBH3	Q96Q83	286 aa	Predicted RBP	12.11	□□□□□ -0.47
NEDD4L-223	ENST00000588516	REPIN1	Q9BWE0	567 aa	Known RBP	12.11	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms