RNA–Protein interactions for RNA: ENST00000587881.1

NEDD4L-220, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-220ENST00000587881 PRH1P02810 166 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 TK1P04183 234 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 AKR1D1P51857 326 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 ARF1P84077 181 aaKnown RBP12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 MEX3BQ6ZN04 569 aaKnown RBP12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 HPSE2Q8WWQ2 592 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 SPIN2AQ99865 258 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 SPIN2BQ9BPZ2 258 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 PBDC1Q9BVG4 233 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 PAPOLGQ9BWT3 736 aaKnown RBP12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 EIF5A2Q9GZV4 153 aaKnown RBP12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 PRO3102Q9H379 93 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 Q9N2K0 584 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 RPS10P5Q9NQ39 176 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 SLC7A10Q9NS82 523 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 UBE2J1Q9Y385 318 aaPredicted RBP12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 PINLYPA6NC86 204 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 NKX2-6A6NCS4 301 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 ZNF98A6NK75 572 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 BCL3P20749 454 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 LMO1P25800 156 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 RPL35P42766 123 aaKnown RBP12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 KCNJ3P48549 501 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 EWSR1Q01844 656 aaKnown RBP eCLIP12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 FOXO1Q12778 655 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 PRDX4Q13162 271 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 SHEQ5VZ18 495 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 TBC1D26Q86UD7 250 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 ZNF695Q8IW36 515 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 OR2C3Q8N628 320 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 ZNF565Q8N9K5 539 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 LFNGQ8NES3 379 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 CT55Q8WUE5 264 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 BOD1Q96IK1 185 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 ABHD14BQ96IU4 210 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 C11orf1Q9H5F2 150 aa12.35□□□□□ -0.43
NEDD4L-220ENST00000587881 A0A1B0GW64 132 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 DUXBA0A1W2PPF3 345 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 NAPSAO96009 420 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 IGHV3-9P01782 118 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 IFNA4P05014 189 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 CTXN2P0C2S0 81 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 COX5BP10606 129 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 NKX2-1P43699 371 aaPredicted RBP12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 RAB5BP61020 215 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 FGF12P61328 243 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 CEACAM21Q3KPI0 293 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 RNF212Q495C1 297 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 SPIN3Q5JUX0 258 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 MKXQ8IYA7 352 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 HSD17B11Q8NBQ5 300 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 OR56B2PQ8NGI1 322 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 SLAMF9Q96A28 289 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 SLC25A31Q9H0C2 315 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 TUBA4BQ9H853 241 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 HAAOP46952 286 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 FHITP49789 147 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 ZNF266Q14584 549 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 MPV17LQ2QL34 196 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 AKIRIN2Q53H80 203 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 SELENOHQ8IZQ5 122 aaKnown RBP12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 C14orf79Q96F83 325 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 CLCC1Q96S66 551 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 FAM173AQ9BQD7 235 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 ZPBPQ9BS86 351 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 SH3BGRL3Q9H299 93 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 ESRP2Q9H6T0 727 aaKnown RBP12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 PLEKHF2Q9H8W4 249 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 LRFN1Q9P244 771 aa12.34□□□□□ -0.43
NEDD4L-220ENST00000587881 TNRC6AQ8NDV7 1962 aaKnown RBP12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 KIR2DS1A0A191URI9 304 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 LAMTOR5O43504 91 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 CCNOP22674 350 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 ACP1P24666 158 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 KIR2DS4P43632 304 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 NOVA1P51513 510 aaKnown RBP12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 GPM6AP51674 278 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 KIR2DS1Q14954 304 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 SPINK14Q6IE38 97 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 SLC23A3Q6PIS1 610 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 MRPL21Q7Z2W9 205 aaKnown RBP12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 TIPARPQ7Z3E1 657 aaKnown RBP12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 ZDHHC23Q8IYP9 409 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 BATF2Q8N1L9 274 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 PSMF1Q92530 271 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 APOBEC3DQ96AK3 386 aaPredicted RBP12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 USB1Q9BQ65 265 aaKnown RBP12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 SLC35B3Q9H1N7 401 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 SMDT1Q9H4I9 107 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 SPACA1Q9HBV2 294 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 COA4Q9NYJ1 87 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 LOXL2Q9Y4K0 774 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 FREM1Q5H8C1 2179 aa12.33□□□□□ -0.44
NEDD4L-220ENST00000587881 C7orf77A4D0Y5 90 aa12.32□□□□□ -0.44
NEDD4L-220ENST00000587881 C5orf49A4QMS7 147 aa12.32□□□□□ -0.44
NEDD4L-220ENST00000587881 FAM24AA6NFZ4 105 aa12.32□□□□□ -0.44
NEDD4L-220ENST00000587881 PCP4L1A6NKN8 68 aa12.32□□□□□ -0.44
NEDD4L-220ENST00000587881 C1orf196B1AJZ1 125 aa12.32□□□□□ -0.44
NEDD4L-220ENST00000587881 TRAPPC2LH3BP13 241 aa12.32□□□□□ -0.44
NEDD4L-220ENST00000587881 MT-ND4LP03901 98 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms