RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 PPP1R35Q8TAP8 253 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 ARHGAP5-AS1Q96IT6 56 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 PRRT1Q99946 306 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 NICN1Q9BSH3 213 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 PECRQ9BY49 303 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 GSX2Q9BZM3 304 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 KCNK15Q9H427 330 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 DYNLRB1Q9NP97 96 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 SLC2A8Q9NY64 477 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 DYSFO75923 2080 aa10.64□□□□□ -0.71
VMP1-202ENST00000585847 A0A0A6YYD4 124 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 TRBV6-6A0A0A6YYG2 114 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 KIR2DS1A0A191URI9 304 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 TMEM235A6NFC5 223 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 SRRM5B3KS81 715 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 DISC1C4P0D8 188 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 MCRIP1C9JLW8 97 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 F5H5P2 479 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 CDIPTO14735 213 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 SH2D1BO14796 132 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 GEMIN2O14893 280 aaKnown RBP10.63□□□□□ -0.71
VMP1-202ENST00000585847 SOCS1O15524 211 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 HPXP02790 462 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 PRKACAP17612 351 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 BCL3P20749 454 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 KIR2DS4P43632 304 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 TMEM50BP56557 158 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 MRPS11P82912 194 aaKnown RBP10.63□□□□□ -0.71
VMP1-202ENST00000585847 MAB21L1Q13394 359 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 IKZF1Q13422 519 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 KIR2DS1Q14954 304 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 TAF9Q16594 264 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 MOGAT2Q3SYC2 334 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 RNASE10Q5GAN6 216 aaKnown RBP10.63□□□□□ -0.71
VMP1-202ENST00000585847 PLAC9Q5JTB6 97 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 VAX1Q5SQQ9 334 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 WDR82Q6UXN9 313 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 TRAPPC6BQ86SZ2 158 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 WDR86Q86TI4 376 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 ZNF554Q86TJ5 538 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 TMEM17Q86X19 198 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 HOGA1Q86XE5 327 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 OR10K1Q8NGX5 313 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 OR2V2Q96R30 315 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 VRK1Q99986 396 aaPredicted RBP10.63□□□□□ -0.71
VMP1-202ENST00000585847 SLC25A21Q9BQT8 299 aaPredicted RBP10.63□□□□□ -0.71
VMP1-202ENST00000585847 C11orf54Q9H0W9 315 aaPredicted RBP10.63□□□□□ -0.71
VMP1-202ENST00000585847 DNTTIP1Q9H147 329 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 BEX4Q9NWD9 120 aaPredicted RBP10.63□□□□□ -0.71
VMP1-202ENST00000585847 SCP2D1Q9UJQ7 156 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 NUBP2Q9Y5Y2 271 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 ABCA2Q9BZC7 2435 aa10.63□□□□□ -0.71
VMP1-202ENST00000585847 A0A1W2PP11 408 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 PLA2G10O15496 165 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 SYNGR1O43759 233 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 PRAF2O60831 178 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 GRPP07492 148 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 GNB3P16520 340 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 LMO1P25800 156 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 RFX2P48378 723 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 KCNJ8Q15842 424 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 DMRTC1Q5HYR2 192 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 STEAP1BQ6NZ63 245 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 RNF144BQ7Z419 303 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 SCGB3A2Q96PL1 93 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 NCOR1P1Q9H4R4 102 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 RAB9BQ9NP90 201 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 RNF7Q9UBF6 113 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 KLK11Q9UBX7 282 aa10.62□□□□□ -0.71
VMP1-202ENST00000585847 hCG_1807616A0A1W2PRN6 198 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 FUOMA2VDF0 154 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 LYNX1G3V0Z9 82 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 F12P00748 615 aaPredicted RBP10.61□□□□□ -0.71
VMP1-202ENST00000585847 CSN2P05814 226 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 CTXN2P0C2S0 81 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 LYNX1P0DP58 116 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 MUC1P15941 1255 aaPredicted RBP10.61□□□□□ -0.71
VMP1-202ENST00000585847 GLRA1P23415 457 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 COL8A2P25067 703 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 NPBWR2P48146 333 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 BTG1P62324 171 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 CCL8P80075 99 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 RBMS2Q15434 407 aaKnown RBP10.61□□□□□ -0.71
VMP1-202ENST00000585847 PIGYQ3MUY2 71 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 NKAPLQ5M9Q1 402 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 TRAT1Q6PIZ9 186 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 CCBE1Q6UXH8 406 aaPredicted RBP10.61□□□□□ -0.71
VMP1-202ENST00000585847 GDPD3Q7L5L3 318 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 NRARPQ7Z6K4 114 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 LRRC75A-AS1Q8N1F1 130 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 GAPTQ8N292 157 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 OR56B4Q8NH76 319 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 FAM216AQ8WUB2 273 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 ITLN1Q8WWA0 313 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 PERPQ96FX8 193 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 NKX3-1Q99801 234 aaPredicted RBP10.61□□□□□ -0.71
VMP1-202ENST00000585847 CMSS1Q9BQ75 279 aaKnown RBP10.61□□□□□ -0.71
VMP1-202ENST00000585847 MARVELD1Q9BSK0 173 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 SAP30LQ9HAJ7 183 aa10.61□□□□□ -0.71
VMP1-202ENST00000585847 HRASLSQ9HDD0 168 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms