RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 CELSR3Q9NYQ7 3312 aa10.72□□□□□ -0.69
SMARCA4-208ENST00000585799 F8VVB4 439 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 F8VWA3 439 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 CRYZL1O95825 349 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 WT1P19544 449 aaPredicted RBP10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 CHATP28329 748 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 QRFPP83859 136 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 VAX1Q5SQQ9 334 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 DBX2Q6ZNG2 339 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 OR10C1Q96KK4 312 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 IGHV3-43A0A0B4J1X8 118 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 DEFB108AA8MXU0 73 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 LEUTXA8MZ59 168 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 LILRA1O75019 489 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 WISP2O76076 250 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 OR2A4O95047 310 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 IGHV3-43DP0DP04 118 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 M6PRP20645 277 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 CD82P27701 267 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 RPL12P30050 165 aaKnown RBP10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 PTGER4P35408 488 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 CAMLGP49069 296 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 OR2A7Q96R45 310 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 CCL28Q9NRJ3 127 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 SLC2A9Q9NRM0 540 aa10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 ZNF107Q9UII5 783 aaPredicted RBP10.71□□□□□ -0.69
SMARCA4-208ENST00000585799 ARPC4-TTLL3A0A0A6YYG9 625 aa10.71□□□□□ -0.7
SMARCA4-208ENST00000585799 HMSDA8MTL9 139 aa10.71□□□□□ -0.7
SMARCA4-208ENST00000585799 ZNF724A8MTY0 619 aa10.71□□□□□ -0.7
SMARCA4-208ENST00000585799 TERTO14746 1132 aaKnown RBP10.71□□□□□ -0.7
SMARCA4-208ENST00000585799 SH2D1BO14796 132 aa10.71□□□□□ -0.7
SMARCA4-208ENST00000585799 MMP7P09237 267 aaPredicted RBP10.71□□□□□ -0.7
SMARCA4-208ENST00000585799 CEACAM21Q3KPI0 293 aa10.71□□□□□ -0.7
SMARCA4-208ENST00000585799 CLLU1Q5K131 121 aa10.71□□□□□ -0.7
SMARCA4-208ENST00000585799 TMEM45BQ96B21 275 aa10.71□□□□□ -0.7
SMARCA4-208ENST00000585799 PRDM14Q9GZV8 571 aa10.71□□□□□ -0.7
SMARCA4-208ENST00000585799 USP34Q70CQ2 3546 aa10.71□□□□□ -0.7
SMARCA4-208ENST00000585799 ZNF503-AS2A6NEH8 195 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 PRRG2O14669 202 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 SNAPC5O75971 98 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 PPYP01298 95 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 ZNF169Q14929 603 aaPredicted RBP10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 OVCH2Q7RTZ1 564 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 OR5A2Q8NGI9 324 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 MRPS24Q96EL2 167 aaKnown RBP10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 OR5AC2Q9NZP5 309 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 BCL2L11O43521 198 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 AANATQ16613 207 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 C9orf106Q8NAJ2 232 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 SUMF2Q8NBJ7 301 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 MDS2Q8NDY4 140 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 OR10V1Q8NGI7 309 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 STOML3Q8TAV4 291 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 SPIN2AQ99865 258 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 SPIN2BQ9BPZ2 258 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 NAA60Q9H7X0 242 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 MPC1Q9Y5U8 109 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 F8W036 122 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 ST8SIA3O43173 380 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 SSSCA1O60232 199 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 TFF1P04155 84 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 CSRP1P21291 193 aaKnown RBP10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 OTX1P32242 354 aaPredicted RBP10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 RPS16P62249 146 aaKnown RBP10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 BLOC1S1P78537 153 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 FOXF2Q12947 444 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 FAM76BQ5HYJ3 339 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 LY6G6FQ5SQ64 297 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 BAP18Q8IXM2 172 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 ADAMTS17Q8TE56 1095 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 TECTBQ96PL2 329 aa10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 EIF5A2Q9GZV4 153 aaKnown RBP10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 MRPS18CQ9Y3D5 142 aaKnown RBP10.7□□□□□ -0.7
SMARCA4-208ENST00000585799 CST7O76096 145 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 EIF2S3P41091 472 aaKnown RBP10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 NKX2-1P43699 371 aaPredicted RBP10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 P2RX3P56373 397 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 OR2A2Q6IF42 318 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 RGS7BPQ6MZT1 257 aaPredicted RBP10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 GAPTQ8N292 157 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 WBP1Q96G27 269 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 POM121L2Q96KW2 1035 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 C1orf147Q96MC9 270 aaPredicted RBP10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 REPIN1Q9BWE0 567 aaKnown RBP10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 C1QTNF5Q9BXJ0 243 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 LINC00470Q9BZP3 86 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 RAB18Q9NP72 206 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 MTCH1Q9NZJ7 389 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 IGHV1-2P23083 117 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 UCP2P55851 309 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 GFRALQ6UXV0 394 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 ARL11Q969Q4 196 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 HS3ST6Q96QI5 342 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 TAF9BQ9HBM6 251 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 OR5B21A6NL26 309 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 CTSDP07339 412 aaPredicted RBP10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 RRASP10301 218 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 RPL7L1Q6DKI1 246 aaKnown RBP10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 CRIM1Q9NZV1 1036 aa10.69□□□□□ -0.7
SMARCA4-208ENST00000585799 SPTBN4Q9H254 2564 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms