RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 CELSR2Q9HCU4 2923 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 CHD3Q12873 2000 aaKnown RBP10.81□□□□□ -0.68
TRIM47-202ENST00000585333 TRBV23-1A0A0A0MS06 115 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 K7N7A8 449 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 SIRPB1O00241 398 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 SLC33A1O00400 549 aaPredicted RBP10.81□□□□□ -0.68
TRIM47-202ENST00000585333 CTDSPLO15194 276 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 NDUFS7O75251 213 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 GYPAP02724 150 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 MELTFP08582 738 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 ERP29P30040 261 aaKnown RBP10.81□□□□□ -0.68
TRIM47-202ENST00000585333 PRSS3P35030 304 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 TAS2R20P59543 309 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 KRTAP10-9P60411 292 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 ACTBP60709 375 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 ACTG1P63261 375 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 COL10A1Q03692 680 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 ZNF846Q147U1 533 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 GRK1Q15835 563 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 CDNFQ49AH0 187 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 ESCO2Q56NI9 601 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 HACD4Q5VWC8 232 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 CD276Q5ZPR3 534 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 Q6P435 159 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 ZNF554Q86TJ5 538 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 LURAP1LQ8IV03 231 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 GDPD1Q8N9F7 314 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 SUMF2Q8NBJ7 301 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 TMEM185AQ8NFB2 350 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 OR4M1Q8NGD0 313 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 NICN1Q9BSH3 213 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 PECRQ9BY49 303 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 MIXL1Q9H2W2 232 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 KCNK15Q9H427 330 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 PATZ1Q9HBE1 687 aaKnown RBP10.81□□□□□ -0.68
TRIM47-202ENST00000585333 ETAA1Q9NY74 926 aa10.81□□□□□ -0.68
TRIM47-202ENST00000585333 IGHV3OR15-7A0A075B7D8 119 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 TMEM30CPA0ZSE6 113 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 CEACAM18A8MTB9 384 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 FOXI3A8MTJ6 420 aaPredicted RBP10.8□□□□□ -0.68
TRIM47-202ENST00000585333 LYNX1G3V0Z9 82 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 MFNGO00587 321 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 SOCS1O15524 211 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 LY6HO94772 140 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 TK1P04183 234 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 LPLP06858 475 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 LYNX1P0DP58 116 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 DTYMKP23919 212 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 DUSP1P28562 367 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 SRSF7Q16629 238 aaKnown RBP eCLIP10.8□□□□□ -0.68
TRIM47-202ENST00000585333 SLC35E4Q6ICL7 350 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 BATF2Q8N1L9 274 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 CD177Q8N6Q3 437 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 FCAMRQ8WWV6 532 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 DEDD2Q8WXF8 326 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 NRGNQ92686 78 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 ARHGAP5-AS1Q96IT6 56 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 GAFA1Q96PS6 74 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 CCL13Q99616 98 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 CMSS1Q9BQ75 279 aaKnown RBP10.8□□□□□ -0.68
TRIM47-202ENST00000585333 BPESC1Q9GZL8 116 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 AUNIPQ9H7T9 357 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 CHMP1AQ9HD42 196 aaPredicted RBP10.8□□□□□ -0.68
TRIM47-202ENST00000585333 TAS2R8Q9NYW2 309 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 OR6C3Q9NZP0 311 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 SLC25A10Q9UBX3 287 aaPredicted RBP10.8□□□□□ -0.68
TRIM47-202ENST00000585333 CLN8Q9UBY8 286 aa10.8□□□□□ -0.68
TRIM47-202ENST00000585333 MRPS7Q9Y2R9 242 aaKnown RBP10.8□□□□□ -0.68
TRIM47-202ENST00000585333 TRAV24A0A0B4J272 114 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 KIR2DS1A0A191URI9 304 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 GABARAPH6UMI1 98 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 ZNF737O75373 536 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 GSTT2BP0CG30 244 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 CD40LGP29965 261 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 KIR2DS4P43632 304 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 AP3S2P59780 193 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 MEF2CQ06413 473 aaPredicted RBP10.79□□□□□ -0.68
TRIM47-202ENST00000585333 KIR2DS1Q14954 304 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 TMEM30BQ3MIR4 351 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 ZNF260Q3ZCT1 412 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 Q5PR19 223 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 FAM201AQ5SY85 155 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 AVPI1Q5T686 147 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 C6orf183Q5T699 404 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 HIST2H2BCQ6DN03 193 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 DNM1P46Q6ZS02 220 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 C6orf201Q7Z4U5 140 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 ZNF565Q8N9K5 539 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 OR5T2Q8NGG2 359 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 ST8SIA4Q92187 359 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 CCDC32Q9BV29 185 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 IFT46Q9NQC8 304 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 DCAF16Q9NXF7 216 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 KCNIP1Q9NZI2 227 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 IL36RNQ9UBH0 155 aa10.79□□□□□ -0.68
TRIM47-202ENST00000585333 ZNF107Q9UII5 783 aaPredicted RBP10.79□□□□□ -0.68
TRIM47-202ENST00000585333 USF3Q68DE3 2245 aa10.78□□□□□ -0.68
TRIM47-202ENST00000585333 TRGV10A0A0A0MS01 117 aa10.78□□□□□ -0.68
TRIM47-202ENST00000585333 A0A0A6YYD4 124 aa10.78□□□□□ -0.68
TRIM47-202ENST00000585333 TRBV6-6A0A0A6YYG2 114 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms