RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 TK1P04183 234 aa14.34□□□□□ -0.11
TOP3A-220ENST00000585031 SNRNP70P08621 437 aaKnown RBP14.34□□□□□ -0.11
TOP3A-220ENST00000585031 IGHV1-8P0DP01 117 aa14.34□□□□□ -0.11
TOP3A-220ENST00000585031 SPI1P17947 270 aa14.34□□□□□ -0.11
TOP3A-220ENST00000585031 ETV1P50549 477 aa14.34□□□□□ -0.11
TOP3A-220ENST00000585031 OR12D2P58182 307 aa14.34□□□□□ -0.11
TOP3A-220ENST00000585031 SLC16A12Q6ZSM3 486 aa14.34□□□□□ -0.11
TOP3A-220ENST00000585031 OR52N1Q8NH53 320 aa14.34□□□□□ -0.11
TOP3A-220ENST00000585031 DUX3Q96PT4 197 aa14.34□□□□□ -0.11
TOP3A-220ENST00000585031 CLEC2DQ9UHP7 191 aa14.34□□□□□ -0.11
TOP3A-220ENST00000585031 AIREO43918 545 aa14.33□□□□□ -0.12
TOP3A-220ENST00000585031 APOL3O95236 402 aa14.33□□□□□ -0.12
TOP3A-220ENST00000585031 ZNF728P0DKX0 622 aa14.33□□□□□ -0.12
TOP3A-220ENST00000585031 AZGP1P25311 298 aaKnown RBP14.33□□□□□ -0.12
TOP3A-220ENST00000585031 GNG3P63215 75 aa14.33□□□□□ -0.12
TOP3A-220ENST00000585031 LSAMPQ13449 338 aa14.33□□□□□ -0.12
TOP3A-220ENST00000585031 HAGHLQ6PII5 290 aaPredicted RBP14.33□□□□□ -0.12
TOP3A-220ENST00000585031 SHFQ7M4L6 423 aa14.33□□□□□ -0.12
TOP3A-220ENST00000585031 KRT74Q7RTS7 529 aa14.33□□□□□ -0.12
TOP3A-220ENST00000585031 ZNF329Q86UD4 541 aa14.33□□□□□ -0.12
TOP3A-220ENST00000585031 POC1AQ8NBT0 407 aa14.33□□□□□ -0.12
TOP3A-220ENST00000585031 Q8NFD4 153 aa14.33□□□□□ -0.12
TOP3A-220ENST00000585031 CNN2Q99439 309 aaKnown RBP14.33□□□□□ -0.12
TOP3A-220ENST00000585031 KIAA2026Q5HYC2 2103 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 DAPL1A0PJW8 107 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 LIMS3P0CW19 117 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 LIMS4P0CW20 117 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 LUMP51884 338 aaPredicted RBP14.32□□□□□ -0.12
TOP3A-220ENST00000585031 RPL23AP62750 156 aaKnown RBP14.32□□□□□ -0.12
TOP3A-220ENST00000585031 CTF1Q16619 201 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 OR2W3Q7Z3T1 314 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 FTMTQ8N4E7 242 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 OR10H4Q8NGA5 316 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 OR6K6Q8NGW6 343 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 ZNF671Q8TAW3 534 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 OPALINQ96PE5 141 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 DCUN1D5Q9BTE7 237 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 RGCCQ9H4X1 137 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 LIN7BQ9HAP6 207 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 ABCB9Q9NP78 766 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 ERVK13-1Q9NX77 482 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 RASL12Q9NYN1 266 aa14.32□□□□□ -0.12
TOP3A-220ENST00000585031 J3QRE1 110 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 MMP23AO75900 390 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 PGA5P0DJD9 388 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 GADD45AP24522 165 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 CHATP28329 748 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 ACTA2P62736 377 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 ACTG2P63267 376 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 CEACAM21Q3KPI0 293 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 MINOS1Q5TGZ0 78 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 BAIAP2L2Q6UXY1 529 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 KRT77Q7Z794 578 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 LHFPL3Q86UP9 236 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 OSR2Q8N2R0 312 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 OR8B12Q8NGG6 310 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 UFD1Q92890 307 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 HIST1H2AAQ96QV6 131 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 SLC25A33Q9BSK2 321 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 OR14J1Q9UGF5 321 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 MINOS1-NBL1R4GNA1 71 aa14.31□□□□□ -0.12
TOP3A-220ENST00000585031 SORL1Q92673 2214 aa14.3□□□□□ -0.12
TOP3A-220ENST00000585031 IGHV2-26A0A0B4J1V2 119 aa14.3□□□□□ -0.12
TOP3A-220ENST00000585031 K7N7A8 449 aa14.3□□□□□ -0.12
TOP3A-220ENST00000585031 OR2T7P0C7T2 308 aa14.3□□□□□ -0.12
TOP3A-220ENST00000585031 CPEP16870 476 aa14.3□□□□□ -0.12
TOP3A-220ENST00000585031 SERPINB10P48595 397 aa14.3□□□□□ -0.12
TOP3A-220ENST00000585031 BLVRAP53004 296 aa14.3□□□□□ -0.12
TOP3A-220ENST00000585031 BDH1Q02338 343 aa14.3□□□□□ -0.12
TOP3A-220ENST00000585031 GALEQ14376 348 aa14.3□□□□□ -0.12
TOP3A-220ENST00000585031 SMIM21Q3B7S5 101 aa14.3□□□□□ -0.12
TOP3A-220ENST00000585031 OR51D1Q8NGF3 324 aa14.3□□□□□ -0.12
TOP3A-220ENST00000585031 OR4P4Q8NGL7 312 aa14.3□□□□□ -0.12
TOP3A-220ENST00000585031 OR6N2Q8NGY6 317 aa14.3□□□□□ -0.12
TOP3A-220ENST00000585031 NDNFQ8TB73 568 aa14.3□□□□□ -0.12
TOP3A-220ENST00000585031 ALG8Q9BVK2 526 aa14.3□□□□□ -0.12
TOP3A-220ENST00000585031 ADGRL4Q9HBW9 690 aa14.3□□□□□ -0.12
TOP3A-220ENST00000585031 APOC1P02654 83 aa14.29□□□□□ -0.12
TOP3A-220ENST00000585031 RBP4P02753 201 aa14.29□□□□□ -0.12
TOP3A-220ENST00000585031 MRPL3P09001 348 aaKnown RBP14.29□□□□□ -0.12
TOP3A-220ENST00000585031 H2BFMP0C1H6 154 aa14.29□□□□□ -0.12
TOP3A-220ENST00000585031 PSMA1P25786 263 aaKnown RBP14.29□□□□□ -0.12
TOP3A-220ENST00000585031 MYCNOSP40205 109 aa14.29□□□□□ -0.12
TOP3A-220ENST00000585031 TAS2R43P59537 309 aa14.29□□□□□ -0.12
TOP3A-220ENST00000585031 ZNF322Q6U7Q0 402 aaPredicted RBP14.29□□□□□ -0.12
TOP3A-220ENST00000585031 MOB3CQ70IA8 216 aa14.29□□□□□ -0.12
TOP3A-220ENST00000585031 C16orf82Q7Z2V1 217 aa14.29□□□□□ -0.12
TOP3A-220ENST00000585031 SBSPONQ8IVN8 264 aa14.29□□□□□ -0.12
TOP3A-220ENST00000585031 SLC35F2Q8IXU6 374 aa14.29□□□□□ -0.12
TOP3A-220ENST00000585031 OR5A2Q8NGI9 324 aa14.29□□□□□ -0.12
TOP3A-220ENST00000585031 RAX2Q96IS3 184 aa14.29□□□□□ -0.12
TOP3A-220ENST00000585031 RBM14Q96PK6 669 aaKnown RBP14.29□□□□□ -0.12
TOP3A-220ENST00000585031 RCHY1Q96PM5 261 aa14.29□□□□□ -0.12
TOP3A-220ENST00000585031 NDUFB11Q9NX14 153 aa14.29□□□□□ -0.12
TOP3A-220ENST00000585031 STUB1Q9UNE7 303 aa14.29□□□□□ -0.12
TOP3A-220ENST00000585031 SSR3Q9UNL2 185 aa14.29□□□□□ -0.12
TOP3A-220ENST00000585031 FRAS1Q86XX4 4008 aa14.28□□□□□ -0.12
TOP3A-220ENST00000585031 PSMB11A5LHX3 300 aa14.28□□□□□ -0.12
TOP3A-220ENST00000585031 ZNF670-ZNF695F2Z2N8 137 aa14.28□□□□□ -0.12
TOP3A-220ENST00000585031 ZNF737O75373 536 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms