RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 LAMP3Q9UQV4 416 aa10.4□□□□□ -0.75
CDK5RAP3-232ENST00000584168 EP300Q09472 2414 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 CACNA1HO95180 2353 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 MDC1Q14676 2089 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 TRAV34A0A0B4J273 112 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 ODAMA1E959 279 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 ZNF716A6NP11 495 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 PIN1P1O15428 100 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 NXPH1P58417 271 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 RND3P61587 244 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 EXOSC7Q15024 291 aaKnown RBP10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 ELOCQ15369 112 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 ZIC1Q15915 447 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 EIPR1Q53HC9 387 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 DPPA3Q6W0C5 159 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 COX15Q7KZN9 410 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 VASH2Q86V25 355 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 TGIF2LYQ8IUE0 185 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 ZNF679Q8IYX0 411 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 AQP3Q92482 292 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 ARHGDIGQ99819 225 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 MED20Q9H944 212 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 ENTPD2Q9Y5L3 495 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 IGHV1-69-2A0A0G2JMI3 117 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 ZNF891A8MT65 544 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 KLRC4-KLRK1H3BQV0 150 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 HYPMO75409 117 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 THY1P04216 161 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 CDK5R1Q15078 307 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 CST9LP1Q5W188 147 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 FAM71F2Q6NXP2 309 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 TMEM64Q6YI46 380 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 FAM219AQ8IW50 185 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 RAB42Q8N4Z0 105 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 APCDD1LQ8NCL9 501 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 DPF1Q92782 380 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 SMIM3Q9BZL3 60 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 FAM60AQ9NP50 221 aa10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 CGGBP1Q9UFW8 167 aaPredicted RBP10.39□□□□□ -0.75
CDK5RAP3-232ENST00000584168 MED19A0JLT2 244 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 CDC42EP2O14613 210 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 MRPL3P09001 348 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 IGLC2P0DOY2 106 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 IGLC3P0DOY3 106 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 GNB3P16520 340 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 GABRA2P47869 451 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 SLC6A8P48029 635 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 CNN1P51911 297 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 GFERP55789 205 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 ZNF85Q03923 595 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 SMAGPQ0VAQ4 97 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 RAB32Q13637 225 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 DECR1Q16698 335 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 TMEM41BQ5BJD5 291 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 LYSMD4Q5XG99 296 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 CLEC18BQ6UXF7 455 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 Q6ZWC4 215 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 PRSS41Q7RTY9 318 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 FER1L6-AS1Q8NA97 138 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 MCHR1Q99705 422 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 PYGO2Q9BRQ0 406 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 GPR27Q9NS67 375 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 FRRS1LQ9P0K9 344 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 WSB1Q9Y6I7 421 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 B9A039 149 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 ERI3O43414 337 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 CLEC3AO75596 197 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 ESDP10768 282 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 CTRLP40313 264 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 OR1D5P58170 312 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 SPATA45Q537H7 98 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 TMEM177Q53S58 311 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 LHFPL2Q6ZUX7 228 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 GDF7Q7Z4P5 450 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 FLVCR1-AS1Q8TAF5 88 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 ASB5Q8WWX0 329 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 SPXQ9BT56 116 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 LRFN3Q9BTN0 628 aa10.38□□□□□ -0.75
CDK5RAP3-232ENST00000584168 ADAMTS9Q9P2N4 1935 aa10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 CDC14CA4D256 554 aa10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 H0Y8G0 127 aa10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 ATXN7O15265 892 aaPredicted RBP10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 RHBDL1O75783 438 aa10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 MPZL1O95297 269 aa10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 CSN2P05814 226 aa10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 FUT1P19526 365 aa10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 RPS4Y1P22090 263 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 RPL12P30050 165 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 FCGR2CP31995 323 aa10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 FAM3BP58499 235 aaPredicted RBP10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 UBE2NP61088 152 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 BAXQ07812 192 aa10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 WDR25Q64LD2 544 aaPredicted RBP10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 FCRL6Q6DN72 434 aa10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 MBOAT2Q6ZWT7 520 aa10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 NUP43Q8NFH3 380 aa10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 FAM213BQ8TBF2 198 aa10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 CDC42EP3Q9UKI2 254 aa10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 TMED7Q9Y3B3 224 aa10.37□□□□□ -0.75
CDK5RAP3-232ENST00000584168 MRPS16Q9Y3D3 137 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms