RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 KCNG3Q8TAE7 436 aa9.16□□□□□ -0.94
TOP3A-216ENST00000583804 S100A16Q96FQ6 103 aaKnown RBP9.16□□□□□ -0.94
TOP3A-216ENST00000583804 CMTM3Q96MX0 182 aa9.16□□□□□ -0.94
TOP3A-216ENST00000583804 TMEM246Q9BRR3 403 aa9.16□□□□□ -0.94
TOP3A-216ENST00000583804 MRI1Q9BV20 369 aa9.16□□□□□ -0.94
TOP3A-216ENST00000583804 NLKQ9UBE8 527 aa9.16□□□□□ -0.94
TOP3A-216ENST00000583804 RABL2AQ9UBK7 228 aaPredicted RBP9.16□□□□□ -0.94
TOP3A-216ENST00000583804 GHRLQ9UBU3 117 aa9.16□□□□□ -0.94
TOP3A-216ENST00000583804 PCDHB10Q9UN67 800 aa9.16□□□□□ -0.94
TOP3A-216ENST00000583804 RABL2BQ9UNT1 228 aa9.16□□□□□ -0.94
TOP3A-216ENST00000583804 ST3GAL6Q9Y274 331 aa9.16□□□□□ -0.94
TOP3A-216ENST00000583804 CCDC168Q8NDH2 2452 aa9.16□□□□□ -0.94
TOP3A-216ENST00000583804 RFPL4AA6NLU0 287 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 VWC2LB2RUY7 222 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 RFPL4AL1F8VTS6 287 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 SIRPB1O00241 398 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 RGS13O14921 159 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 OR7C1O76099 320 aaPredicted RBP9.15□□□□□ -0.94
TOP3A-216ENST00000583804 PSG2P11465 335 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 SLC25A16P16260 332 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 RAB6AP20340 208 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 BLVRBP30043 206 aaPredicted RBP9.15□□□□□ -0.94
TOP3A-216ENST00000583804 RBM11P57052 281 aaKnown RBP9.15□□□□□ -0.94
TOP3A-216ENST00000583804 FGF12P61328 243 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 ATAD3CQ5T2N8 411 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 TEX36Q5VZQ5 186 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 FAM90A1Q86YD7 464 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 SPICQ8N5J4 248 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 ENKURQ8TC29 256 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 ZNF486Q96H40 463 aaPredicted RBP9.15□□□□□ -0.94
TOP3A-216ENST00000583804 ARHGAP5-AS1Q96IT6 56 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 ST6GAL2Q96JF0 529 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 ABHD1Q96SE0 405 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 CCL13Q99616 98 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 URM1Q9BTM9 101 aaKnown RBP9.15□□□□□ -0.94
TOP3A-216ENST00000583804 AUNIPQ9H7T9 357 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 RHOFQ9HBH0 211 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 HES4Q9HCC6 221 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 IL36GQ9NZH8 169 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 GLS2Q9UI32 602 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 TANC2Q9HCD6 1990 aa9.15□□□□□ -0.94
TOP3A-216ENST00000583804 PRRC2AP48634 2157 aaKnown RBP9.15□□□□□ -0.95
TOP3A-216ENST00000583804 IGHV4-61A0A0C4DH41 118 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 UBE2QL1A1L167 161 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 METTL21EPA6NDL7 271 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 TMEM235A6NFC5 223 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 RNF223E7ERA6 249 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 LYRM1O43325 122 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 ADAM20O43506 726 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 NDUFA2O43678 99 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 KNG1P01042 644 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 ZNF44P15621 663 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 PRDX2P32119 198 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 CAPZA1P52907 286 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 DGCR2P98153 550 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 TMEM155Q4W5P6 130 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 ELP2Q6IA86 826 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 PLET1Q6UQ28 207 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 LYPD2Q6UXB3 125 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 BAIAP2L2Q6UXY1 529 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 C6orf201Q7Z4U5 140 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 NUDCD2Q8WVJ2 157 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 RAB40AQ8WXH6 277 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 Q96M66 194 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 REG4Q9BYZ8 158 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 ABCG5Q9H222 651 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 DIABLOQ9NR28 239 aa9.15□□□□□ -0.95
TOP3A-216ENST00000583804 CEACAM18A8MTB9 384 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 DEGS1O15121 323 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 TMPRSS2O15393 492 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 FSTL3O95633 263 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 CD3GP09693 182 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 RPS2P15880 293 aaKnown RBP9.14□□□□□ -0.95
TOP3A-216ENST00000583804 USF1P22415 310 aaPredicted RBP9.14□□□□□ -0.95
TOP3A-216ENST00000583804 CPT2P23786 658 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 SCAND1P57086 179 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 NDUFA5Q16718 116 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 PLAC9Q5JTB6 97 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 STUMQ69YW2 141 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 PYHIN1Q6K0P9 492 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 BPIFB2Q8N4F0 458 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 Q8NFD4 153 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 OR10R2Q8NGX6 335 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 CLDND2Q8NHS1 167 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 ANGPTL6Q8NI99 470 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 NEK7Q8TDX7 302 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 RAB3CQ96E17 227 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 MRPS24Q96EL2 167 aaKnown RBP9.14□□□□□ -0.95
TOP3A-216ENST00000583804 HDHD3Q9BSH5 251 aaPredicted RBP9.14□□□□□ -0.95
TOP3A-216ENST00000583804 MARVELD1Q9BSK0 173 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 MMP28Q9H239 520 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 MIOXQ9UGB7 285 aa9.14□□□□□ -0.95
TOP3A-216ENST00000583804 IGKV1D-17A0A075B6S4 117 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 A0A0B4J293 547 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 A0A1B0GW55 424 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 MEX3AA1L020 520 aaKnown RBP9.13□□□□□ -0.95
TOP3A-216ENST00000583804 NKX6-3A6NJ46 265 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 RAB27BO00194 218 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 SH2D1BO14796 132 aa9.13□□□□□ -0.95
TOP3A-216ENST00000583804 XRCC3O43542 346 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms