RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 SPIN3Q5JUX0 258 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 AHSA2Q719I0 299 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 COMTD1Q86VU5 262 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 C10orf107Q8IVU9 208 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 BPIFB6Q8NFQ5 453 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 FAM45AQ8TCE6 357 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 RORBQ92753 470 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 TMIGD2Q96BF3 282 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 TVP23CQ96ET8 276 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 CYTH2Q99418 400 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 OR52A5Q9H2C5 316 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 DUSP21Q9H596 190 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 MRM2Q9UI43 246 aaKnown RBP1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 FADS3Q9Y5Q0 445 aa1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 ZNF706Q9Y5V0 76 aaPredicted RBP1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.9□□□□□ -2.11
SMCHD1-209ENST00000583441 POLR3AO14802 1390 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 NID2Q14112 1375 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 IGKV3D-11A0A0A0MRZ8 115 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 TRAV8-3A0A0A6YYJ7 113 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 A0A1B0GTI1 187 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 C4orf51C9J302 202 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 HSBP1L1C9JCN9 74 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 F5H5P2 479 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 H3BQ85 93 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 C15orf65H3BRN8 121 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 TCF21O43680 179 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 PDCD6O75340 191 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 IGLV6-57P01721 117 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 IGKV4-1P06312 121 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 ZNF35P13682 527 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 GTF2F2P13984 249 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 CNTFRP26992 372 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 TSPOP30536 169 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 PYCR1P32322 319 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 UGT2B10P36537 528 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 MAGEA3P43357 314 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 CBX5P45973 191 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 C1QTNF8P60827 252 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 NXNL2Q5VZ03 156 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 ZNF660Q6AZW8 331 aaPredicted RBP1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 AMMECR1LQ6DCA0 310 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 Q6ZQT7 251 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 FAM183BPQ6ZVS7 135 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 SYCE1Q8N0S2 351 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 ZNF664Q8N3J9 261 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 SLC25A45Q8N413 288 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 ZNF738Q8NE65 137 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 OR2M3Q8NG83 312 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 OR2AE1Q8NHA4 323 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 DTD1Q8TEA8 209 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 PPWD1Q96BP3 646 aaKnown RBP1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 SERPINB11Q96P15 392 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 OLFM3Q96PB7 478 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 DSN1Q9H410 356 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 POMKQ9H5K3 350 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 IFT46Q9NQC8 304 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 ASF1BQ9NVP2 202 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 RBM12B-AS1Q9P1G2 102 aa1.89□□□□□ -2.11
SMCHD1-209ENST00000583441 IGHV2-26A0A0B4J1V2 119 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 TRAV8-2A0A0B4J237 113 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 H3BP45 60 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 M0QX08 132 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 M0QXV9 152 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 ISLRO14498 428 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 KLHL2O95198 593 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 CA2P00918 260 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 AKR1C4P17516 323 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 KLF3P57682 345 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 RAB25P57735 213 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 PRDX1Q06830 199 aaKnown RBP1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 IHHQ14623 411 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 ANGPT1Q15389 498 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 SYCP1Q15431 976 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 TMEM249Q2WGJ8 235 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 LGALSLQ3ZCW2 172 aaPredicted RBP1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 FAM162BQ5T6X4 162 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 ZNF470Q6ECI4 717 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 DGAT2L6Q6ZPD8 337 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 SSX7Q7RTT5 188 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 ADM2Q7Z4H4 148 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 CMTM2Q8TAZ6 248 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 OR5P2Q8WZ92 322 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 HBEGFQ99075 208 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 ACBD6Q9BR61 282 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 MFSD1Q9H3U5 465 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 TREM1Q9NP99 234 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 POFUT2Q9Y2G5 429 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 SNX24Q9Y343 169 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 ICOSQ9Y6W8 199 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 R4GN34 69 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 ABCB11O95342 1321 aa1.88□□□□□ -2.11
SMCHD1-209ENST00000583441 BAZ2AQ9UIF9 1905 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-209ENST00000583441 IGHV1-45A0A0A0MS14 117 aa1.87□□□□□ -2.11
SMCHD1-209ENST00000583441 A0A1B0GX12 115 aa1.87□□□□□ -2.11
SMCHD1-209ENST00000583441 FAM183AA6NL82 134 aa1.87□□□□□ -2.11
SMCHD1-209ENST00000583441 ZNF729A6NN14 1252 aaPredicted RBP1.87□□□□□ -2.11
SMCHD1-209ENST00000583441 SGCEO43556 437 aa1.87□□□□□ -2.11
SMCHD1-209ENST00000583441 POP7O75817 140 aaKnown RBP1.87□□□□□ -2.11
SMCHD1-209ENST00000583441 SNAP29O95721 258 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms