RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 TNNC1P63316 161 aa2.53□□□□□ -2
SMARCE1-219ENST00000583294 NXNL2Q5VZ03 156 aa2.53□□□□□ -2
SMARCE1-219ENST00000583294 MARCH3Q86UD3 253 aa2.53□□□□□ -2
SMARCE1-219ENST00000583294 COMTD1Q86VU5 262 aa2.53□□□□□ -2
SMARCE1-219ENST00000583294 OR2M3Q8NG83 312 aa2.53□□□□□ -2
SMARCE1-219ENST00000583294 SIKE1Q9BRV8 207 aa2.53□□□□□ -2
SMARCE1-219ENST00000583294 RHOFQ9HBH0 211 aa2.53□□□□□ -2
SMARCE1-219ENST00000583294 PCNX2A6NKB5 2137 aa2.53□□□□□ -2.01
SMARCE1-219ENST00000583294 NOS1P29475 1434 aa2.52□□□□□ -2.01
SMARCE1-219ENST00000583294 A0A1B0GW15 77 aa2.52□□□□□ -2.01
SMARCE1-219ENST00000583294 E7EQL1 145 aa2.52□□□□□ -2.01
SMARCE1-219ENST00000583294 M0QXV9 152 aa2.52□□□□□ -2.01
SMARCE1-219ENST00000583294 CGB3P0DN86 165 aa2.52□□□□□ -2.01
SMARCE1-219ENST00000583294 CGB7P0DN87 165 aa2.52□□□□□ -2.01
SMARCE1-219ENST00000583294 CRABP2P29373 138 aa2.52□□□□□ -2.01
SMARCE1-219ENST00000583294 UBE2KP61086 200 aa2.52□□□□□ -2.01
SMARCE1-219ENST00000583294 TNFRSF9Q07011 255 aa2.52□□□□□ -2.01
SMARCE1-219ENST00000583294 CYHR1Q6ZMK1 362 aa2.52□□□□□ -2.01
SMARCE1-219ENST00000583294 C10orf107Q8IVU9 208 aa2.52□□□□□ -2.01
SMARCE1-219ENST00000583294 MAL2Q969L2 176 aa2.52□□□□□ -2.01
SMARCE1-219ENST00000583294 ZMYND19Q96E35 227 aaPredicted RBP2.52□□□□□ -2.01
SMARCE1-219ENST00000583294 SLC25A44Q96H78 314 aaPredicted RBP2.52□□□□□ -2.01
SMARCE1-219ENST00000583294 APOL4Q9BPW4 351 aa2.52□□□□□ -2.01
SMARCE1-219ENST00000583294 TMBIM4Q9HC24 238 aa2.52□□□□□ -2.01
SMARCE1-219ENST00000583294 SPATA31E1Q6ZUB1 1445 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 IGLV10-54A0A075B6I4 117 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 TRAV8-3A0A0A6YYJ7 113 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 MYBPHLA2RUH7 354 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 PGPA6NDG6 321 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 A6NED7 52 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 PSMD11O00231 422 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 GCLMP48507 274 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 C18orf21Q32NC0 220 aaPredicted RBP2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 TMEM215Q68D42 235 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 HBMQ6B0K9 141 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 SMARCD3Q6STE5 483 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 Q6ZQT7 251 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 RBM45Q8IUH3 476 aaKnown RBP2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 RPRMLQ8N4K4 120 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 OR2AE1Q8NHA4 323 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 OR5P3Q8WZ94 311 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 ZNF75CPQ92670 426 aaPredicted RBP2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 OLFM3Q96PB7 478 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 RAB1BQ9H0U4 201 aa2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 NXT1Q9UKK6 140 aaKnown RBP2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 ZNF443Q9Y2A4 671 aaPredicted RBP2.51□□□□□ -2.01
SMARCE1-219ENST00000583294 H3BMM0 161 aa2.5□□□□□ -2.01
SMARCE1-219ENST00000583294 HLA-AP01891 365 aaKnown RBP2.5□□□□□ -2.01
SMARCE1-219ENST00000583294 S100A9P06702 114 aaKnown RBP2.5□□□□□ -2.01
SMARCE1-219ENST00000583294 GABRA1P14867 456 aa2.5□□□□□ -2.01
SMARCE1-219ENST00000583294 TTPAP49638 278 aa2.5□□□□□ -2.01
SMARCE1-219ENST00000583294 VSNL1P62760 191 aa2.5□□□□□ -2.01
SMARCE1-219ENST00000583294 SSX6Q7RTT6 188 aa2.5□□□□□ -2.01
SMARCE1-219ENST00000583294 C3orf22Q8N5N4 141 aa2.5□□□□□ -2.01
SMARCE1-219ENST00000583294 BPIFB6Q8NFQ5 453 aa2.5□□□□□ -2.01
SMARCE1-219ENST00000583294 OR4K17Q8NGC6 315 aa2.5□□□□□ -2.01
SMARCE1-219ENST00000583294 APOBEC3DQ96AK3 386 aaPredicted RBP2.5□□□□□ -2.01
SMARCE1-219ENST00000583294 UBE2WQ96B02 151 aa2.5□□□□□ -2.01
SMARCE1-219ENST00000583294 BIRC8Q96P09 236 aa2.5□□□□□ -2.01
SMARCE1-219ENST00000583294 TRIB3Q96RU7 358 aa2.5□□□□□ -2.01
SMARCE1-219ENST00000583294 SDHAF1A6NFY7 115 aa2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 CNTFRP26992 372 aa2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 TRAM1Q15629 374 aa2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 TRIP13Q15645 432 aaPredicted RBP2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 BCL2A1Q16548 175 aa2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 ELP2Q6IA86 826 aa2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 ST13P4Q8IZP2 240 aaPredicted RBP2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 SPICQ8N5J4 248 aa2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 TRIML2Q8N7C3 387 aa2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 GATD1Q8NB37 220 aa2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 MSANTD3Q96H12 275 aa2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 CPB2Q96IY4 423 aa2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 CATSPER2Q96P56 530 aa2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 TSSK6Q9BXA6 273 aa2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 IFT46Q9NQC8 304 aa2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 CYB5R1Q9UHQ9 305 aa2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 STK38LQ9Y2H1 464 aa2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 U3KQK5 164 aa2.49□□□□□ -2.01
SMARCE1-219ENST00000583294 J3QRE1 110 aa2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 SHOX2O60902 331 aaPredicted RBP2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 ELK4P28324 431 aa2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 GZMMP51124 257 aa2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 PLTPP55058 493 aa2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 KRTAP12-3P60328 96 aa2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 HBG1P69891 147 aa2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 HBG2P69892 147 aa2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 DHRS2Q13268 280 aa2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 LAIR2Q6ISS4 152 aa2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 LYPD6Q86Y78 171 aa2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 CDRT4Q8N9R6 151 aa2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 ZNF738Q8NE65 137 aa2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 ZCCHC13Q8WW36 166 aaKnown RBP2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 PITX2Q99697 317 aa2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 HAUS4Q9H6D7 363 aa2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 NAGKQ9UJ70 344 aa2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 BTRCQ9Y297 605 aa2.48□□□□□ -2.01
SMARCE1-219ENST00000583294 C3orf84H3BNL1 204 aa2.47□□□□□ -2.01
SMARCE1-219ENST00000583294 BOLA2-SMG1P6H3BVE0 249 aa2.47□□□□□ -2.01
SMARCE1-219ENST00000583294 SLC2A1P11166 492 aa2.47□□□□□ -2.01
SMARCE1-219ENST00000583294 CTLA4P16410 223 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms