RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	SRSF8	Q9BRL6	282 aa	Known RBP	3.65	□□□□□ -1.83
MSI2-216	ENST00000582772	OR51J1	Q9H342	316 aa		3.65	□□□□□ -1.83
MSI2-216	ENST00000582772	OR52D1	Q9H346	318 aa		3.65	□□□□□ -1.83
MSI2-216	ENST00000582772	PIGU	Q9H490	435 aa		3.65	□□□□□ -1.83
MSI2-216	ENST00000582772	SRD5A3	Q9H8P0	318 aa		3.65	□□□□□ -1.83
MSI2-216	ENST00000582772	MEPE	Q9NQ76	525 aa	Predicted RBP	3.65	□□□□□ -1.83
MSI2-216	ENST00000582772	TUBG2	Q9NRH3	451 aa		3.65	□□□□□ -1.83
MSI2-216	ENST00000582772	SLC13A4	Q9UKG4	626 aa		3.65	□□□□□ -1.83
MSI2-216	ENST00000582772	PAIP2B	Q9ULR5	123 aa	Known RBP	3.65	□□□□□ -1.83
MSI2-216	ENST00000582772	N6AMT1	Q9Y5N5	214 aa		3.65	□□□□□ -1.83
MSI2-216	ENST00000582772	TRAV27	A0A087WT01	109 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772		A0A1B0GWA3	101 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	CDHR4	A6H8M9	788 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	FABP12	A6NFH5	140 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	HMX3	A6NHT5	357 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	DUXA	A6NLW8	204 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	C12orf71	A8MTZ7	269 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	ODF3B	A8MYP8	253 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	NPIPB9	F8W1W9	429 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	GTPBP1	O00178	669 aa	Known RBP	3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	MAGEB4	O15481	346 aa	Predicted RBP	3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	RNF13	O43567	381 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	LANCL1	O43813	399 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	STX11	O75558	287 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	RHBDL1	O75783	438 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	CCNK	O75909	580 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	AKR7A3	O95154	331 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	IFNA10	P01566	189 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	HLA-DQB1	P01920	261 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	APOA1	P02647	267 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	DBI	P07108	87 aa	Known RBP	3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	MRPL3	P09001	348 aa	Known RBP	3.64	□□□□□ -1.83
MSI2-216	ENST00000582772		P0C879	139 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	CLU	P10909	449 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	CEL	P19835	753 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	RPS5	P46782	204 aa	Known RBP	3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	HCCS	P53701	268 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	DEFA1	P59665	94 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	DEFA3	P59666	94 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	PPP1CB	P62140	327 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	PPP3R1	P63098	170 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	POU6F2	P78424	691 aa	Predicted RBP	3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	PITPNA	Q00169	270 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	PNLIPRP3	Q17RR3	467 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	NDUFAF6	Q330K2	333 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	RNF212	Q495C1	297 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	PYDC2	Q56P42	97 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772		Q5BKY6	102 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	LDLRAD2	Q5SZI1	272 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	ARMC4	Q5T2S8	1044 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	PDZK1	Q5T2W1	519 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	RSBN1	Q5VWQ0	802 aa	Predicted RBP	3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	TMEM225	Q6GV28	225 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	FAM131A	Q6UXB0	335 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	TMPRSS11F	Q6ZWK6	438 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	UTS2B	Q765I0	119 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	HAPLN4	Q86UW8	402 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	SKA3	Q8IX90	412 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	STPG2	Q8N412	459 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	FGFRL1	Q8N441	504 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	GDPD1	Q8N9F7	314 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	CDRT4	Q8N9R6	151 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	CYB561A3	Q8NBI2	242 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	SLC37A3	Q8NCC5	494 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	C19orf18	Q8NEA5	215 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	OR2T33	Q8NG76	320 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	OR13C5	Q8NGS8	318 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	FANK1	Q8TC84	345 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	TMEM239	Q8WW34	195 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	ZNRF4	Q8WWF5	429 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	CAPSL	Q8WWF8	208 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	SLC7A6	Q92536	515 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	DDIT4L	Q96D03	193 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	DIRAS2	Q96HU8	199 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	OR2M2	Q96R28	347 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	STAC	Q99469	402 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	TBX5	Q99593	518 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	SLC25A33	Q9BSK2	321 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	GGTLC1	Q9BX51	225 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	HRH4	Q9H3N8	390 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	HEXA-AS1	Q9H8Q6	139 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	NEK6	Q9HC98	313 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	DUSP22	Q9NRW4	184 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	COMMD3	Q9UBI1	195 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	NUFIP1	Q9UHK0	495 aa	Known RBP	3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	ZNF232	Q9UNY5	417 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	RASD1	Q9Y272	281 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772	SIGLEC7	Q9Y286	467 aa		3.64	□□□□□ -1.83
MSI2-216	ENST00000582772		A0A0B4J203	849 aa		3.63	□□□□□ -1.83
MSI2-216	ENST00000582772		A0A0B4J2E0	115 aa		3.63	□□□□□ -1.83
MSI2-216	ENST00000582772		A0A1B0GX12	115 aa		3.63	□□□□□ -1.83
MSI2-216	ENST00000582772	OOEP	A6NGQ2	149 aa		3.63	□□□□□ -1.83
MSI2-216	ENST00000582772		A6NIN4	97 aa		3.63	□□□□□ -1.83
MSI2-216	ENST00000582772	PRR32	B1ATL7	298 aa		3.63	□□□□□ -1.83
MSI2-216	ENST00000582772	LRRN3	E7EW58	273 aa		3.63	□□□□□ -1.83
MSI2-216	ENST00000582772	MS4A18	H0YCH9	400 aa		3.63	□□□□□ -1.83
MSI2-216	ENST00000582772	RGS13	O14921	159 aa		3.63	□□□□□ -1.83
MSI2-216	ENST00000582772	FMO6P	O60774	539 aa		3.63	□□□□□ -1.83
MSI2-216	ENST00000582772	AGR2	O95994	175 aa		3.63	□□□□□ -1.83
MSI2-216	ENST00000582772	IGLV1-47	P01700	117 aa		3.63	□□□□□ -1.83

Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms