RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 WNT2P09544 360 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 TNFSF8P32971 234 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 OR3A1P47881 315 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 LMO4P61968 165 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 IL13RA1P78552 427 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 FAM189A2Q15884 450 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 PAN3Q58A45 887 aaKnown RBP7.93□□□□□ -1.14
RFFL-210ENST00000582308 ATAD3CQ5T2N8 411 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 SHEQ5VZ18 495 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 OLFML2AQ68BL7 652 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 RAB12Q6IQ22 244 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 CNIH2Q6PI25 160 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 ZNF841Q6ZN19 808 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 C6orf201Q7Z4U5 140 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 IZUMO1Q8IYV9 350 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 BPIFB2Q8N4F0 458 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 ZNF561Q8N587 486 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 SPICQ8N5J4 248 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 ASCC1Q8N9N2 400 aaKnown RBP7.93□□□□□ -1.14
RFFL-210ENST00000582308 SUMF2Q8NBJ7 301 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 CHST4Q8NCG5 386 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 OR4S1Q8NGB4 309 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 OR6Q1Q8NGQ2 317 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 CLDND2Q8NHS1 167 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 S100A16Q96FQ6 103 aaKnown RBP7.93□□□□□ -1.14
RFFL-210ENST00000582308 MED30Q96HR3 178 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 ARHGAP5-AS1Q96IT6 56 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 SNX22Q96L94 193 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 Q96MF0 132 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 NEDD4LQ96PU5 975 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 SULT4A1Q9BR01 284 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 FAAP24Q9BTP7 215 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 DPCDQ9BVM2 203 aaPredicted RBP7.93□□□□□ -1.14
RFFL-210ENST00000582308 PECRQ9BY49 303 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 CHST6Q9GZX3 395 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 PPA2Q9H2U2 334 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 PATZ1Q9HBE1 687 aaKnown RBP7.93□□□□□ -1.14
RFFL-210ENST00000582308 MIOXQ9UGB7 285 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 KCNK7Q9Y2U2 307 aa7.93□□□□□ -1.14
RFFL-210ENST00000582308 ABCA1O95477 2261 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 CREBBPQ92793 2442 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 FLNAP21333 2647 aaKnown RBP7.92□□□□□ -1.14
RFFL-210ENST00000582308 TRAV18A0A075B6X5 111 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 A0A096LNT2 108 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 A0A0A6YYH2 397 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 UBE2QL1A1L167 161 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 NKX6-3A6NJ46 265 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 A6NJ64 397 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 MFNGO00587 321 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 HSPB6O14558 160 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 DVL1O14640 695 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 XRCC3O43542 346 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 IGHV2-5P01817 119 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 TK1P04183 234 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 GLAP06280 429 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 RPS2P15880 293 aaKnown RBP7.92□□□□□ -1.14
RFFL-210ENST00000582308 SLC25A16P16260 332 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 GNB3P16520 340 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 SEC61A1P61619 476 aaKnown RBP7.92□□□□□ -1.14
RFFL-210ENST00000582308 MADCAM1Q13477 382 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 CDNFQ49AH0 187 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 NKAPLQ5M9Q1 402 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 Q6ZTK2 550 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 SLC36A1Q7Z2H8 476 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 TMEM185AQ8NFB2 350 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 ST8SIA4Q92187 359 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 DYRK2Q92630 601 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 RAB3CQ96E17 227 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 NEIL1Q96FI4 390 aaPredicted RBP7.92□□□□□ -1.14
RFFL-210ENST00000582308 DIRAS2Q96HU8 199 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 WDFY2Q96P53 400 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 SOSTQ9BQB4 213 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 NUDT16L1Q9BRJ7 211 aaKnown RBP7.92□□□□□ -1.14
RFFL-210ENST00000582308 ZMAT3Q9HA38 289 aaKnown RBP7.92□□□□□ -1.14
RFFL-210ENST00000582308 SPACA1Q9HBV2 294 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 DIABLOQ9NR28 239 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 PLEKHJ1Q9NW61 149 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 ELF5Q9UKW6 265 aaPredicted RBP7.92□□□□□ -1.14
RFFL-210ENST00000582308 HSF4Q9ULV5 492 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 PCDHB10Q9UN67 800 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 TEX15Q9BXT5 2789 aa7.92□□□□□ -1.14
RFFL-210ENST00000582308 MCRIP1C9JLW8 97 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 H3BUI4 141 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 NDUFB3O43676 98 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 SCGNO76038 276 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 HLA-DQB1P01920 261 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 PTHLHP12272 177 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 HIST1H1DP16402 221 aaKnown RBP7.91□□□□□ -1.14
RFFL-210ENST00000582308 USF1P22415 310 aaPredicted RBP7.91□□□□□ -1.14
RFFL-210ENST00000582308 IL2RGP31785 369 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 S100A5P33763 92 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 TAS2R20P59543 309 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 GRK1Q15835 563 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 ZNF260Q3ZCT1 412 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 TMEM69Q5SWH9 247 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 WDR25Q64LD2 544 aaPredicted RBP7.91□□□□□ -1.14
RFFL-210ENST00000582308 CCDC190Q86UF4 302 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 OR8H2Q8N162 312 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 WFDC11Q8NEX6 87 aa7.91□□□□□ -1.14
RFFL-210ENST00000582308 OR8B3Q8NGG8 313 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms