RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 SLC22A5O76082 557 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 DIRAS3O95661 229 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 HLA-AP01891 365 aaKnown RBP7.91□□□□□ -1.14
SS18-220ENST00000582092 HPXP02790 462 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 ZNF735P0CB33 412 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 SULT1A3P0DMM9 295 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 SULT1A4P0DMN0 295 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 PPP3CBP16298 524 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 DNASE1P24855 282 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 PTAFRP25105 342 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 GRNP28799 593 aaKnown RBP7.91□□□□□ -1.14
SS18-220ENST00000582092 GLRXP35754 106 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 NPY4RP50391 375 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 NKX2-5P52952 324 aaPredicted RBP7.91□□□□□ -1.14
SS18-220ENST00000582092 UBE2MP61081 183 aaKnown RBP7.91□□□□□ -1.14
SS18-220ENST00000582092 RAP2BP61225 183 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 ABCA11PQ4W5N1 156 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 NHLRC3Q5JS37 347 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 FAHD2BQ6P2I3 314 aaPredicted RBP7.91□□□□□ -1.14
SS18-220ENST00000582092 SLC22A25Q6T423 547 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 SLC36A1Q7Z2H8 476 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 SLC25A42Q86VD7 318 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 ZBTB8BQ8NAP8 495 aaPredicted RBP7.91□□□□□ -1.14
SS18-220ENST00000582092 Q8NFD4 153 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 OR2Z1Q8NG97 314 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 MARCH1Q8TCQ1 289 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 FAHD2AQ96GK7 314 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 ZNF486Q96H40 463 aaPredicted RBP7.91□□□□□ -1.14
SS18-220ENST00000582092 PDCD10Q9BUL8 212 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 MYOZ1Q9NP98 299 aaPredicted RBP7.91□□□□□ -1.14
SS18-220ENST00000582092 COMMD9Q9P000 198 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 ANAPC10Q9UM13 185 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 MGAT4AQ9UM21 535 aa7.91□□□□□ -1.14
SS18-220ENST00000582092 MEIKINA0A087WXM9 373 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 TEX13DA0A0J9YY54 714 aaPredicted RBP7.9□□□□□ -1.14
SS18-220ENST00000582092 KIR2DS1A0A191URI9 304 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 FAM221AA4D161 298 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 NKX2-6A6NCS4 301 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 HSPB6O14558 160 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 GOSR2O14653 212 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 FABP7O15540 132 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 LILRA1O75019 489 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 FCGR3AP08637 254 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 CTXN2P0C2S0 81 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 OR5H8P0DN80 308 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 VSIG10L2P0DP72 767 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 FPR2P25090 351 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 DUSP1P28562 367 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 S100GP29377 79 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 MDH2P40926 338 aaKnown RBP7.9□□□□□ -1.14
SS18-220ENST00000582092 KIR2DS4P43632 304 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 KIR2DS1Q14954 304 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 SURF2Q15527 256 aaPredicted RBP7.9□□□□□ -1.14
SS18-220ENST00000582092 KCNJ8Q15842 424 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 PAN3Q58A45 887 aaKnown RBP7.9□□□□□ -1.14
SS18-220ENST00000582092 SPIN3Q5JUX0 258 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 ATPAF1Q5TC12 328 aaPredicted RBP7.9□□□□□ -1.14
SS18-220ENST00000582092 SIGIRRQ6IA17 410 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 LYG2Q86SG7 212 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 SGPP2Q8IWX5 399 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 MUC20Q8N307 709 aaPredicted RBP7.9□□□□□ -1.14
SS18-220ENST00000582092 OR2AK2Q8NG84 335 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 OR11H7Q8NGC8 314 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 OR5T2Q8NGG2 359 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 OR52B4Q8NGK2 314 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 COQ8AQ8NI60 647 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 CASTOR1Q8WTX7 329 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 ASB13Q8WXK3 278 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 RDH5Q92781 318 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 C14orf79Q96F83 325 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 ZNF2Q9BSG1 426 aaPredicted RBP7.9□□□□□ -1.14
SS18-220ENST00000582092 HDHD3Q9BSH5 251 aaPredicted RBP7.9□□□□□ -1.14
SS18-220ENST00000582092 MSL2Q9HCI7 577 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 UFSP2Q9NUQ7 469 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 CRIM1Q9NZV1 1036 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 OR14J1Q9UGF5 321 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 NDRG3Q9UGV2 375 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 KCNIP3Q9Y2W7 256 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 ATP23Q9Y6H3 246 aa7.9□□□□□ -1.14
SS18-220ENST00000582092 NOTCH2Q04721 2471 aa7.9□□□□□ -1.15
SS18-220ENST00000582092 CYSRT1A8MQ03 144 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 FAM25EA8MYX2 175 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 F5H5P2 479 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 H0YL77 283 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 TK1P04183 234 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 ACAA1P09110 424 aaPredicted RBP7.89□□□□□ -1.15
SS18-220ENST00000582092 GIPP09681 153 aaPredicted RBP7.89□□□□□ -1.15
SS18-220ENST00000582092 ZNF728P0DKX0 622 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 GLRA1P23415 457 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 CD40P25942 277 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 ASCL1P50553 236 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 SEC61A1P61619 476 aaKnown RBP7.89□□□□□ -1.15
SS18-220ENST00000582092 ZNF154Q13106 437 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 MPPED2Q15777 294 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 SRSF7Q16629 238 aaKnown RBP eCLIP7.89□□□□□ -1.15
SS18-220ENST00000582092 ALKBH6Q3KRA9 238 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 TMEM128Q5BJH2 165 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 LPCAT3Q6P1A2 487 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 KCTD9Q7L273 389 aa7.89□□□□□ -1.15
SS18-220ENST00000582092 NLRC3Q7RTR2 1065 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 177.1 ms