RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 CYP2R1Q6VVX0 501 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 HDXQ7Z353 690 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 OR11H1Q8NG94 326 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 C4orf3Q8WVX3 66 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 BORCS8Q96FH0 119 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 PLEKHA1Q9HB21 404 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 ING3Q9NXR8 418 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 SNX5Q9Y5X3 404 aa9.95□□□□□ -0.82
SS18-219ENST00000581570 ODAMA1E959 279 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 ZNF729A6NN14 1252 aaPredicted RBP9.94□□□□□ -0.82
SS18-219ENST00000581570 NCBP2LA6PVI3 153 aaKnown RBP9.94□□□□□ -0.82
SS18-219ENST00000581570 H3BSH0 61 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 J3QR06 171 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 MAGEB4O15481 346 aaPredicted RBP9.94□□□□□ -0.82
SS18-219ENST00000581570 GATBO75879 557 aaKnown RBP9.94□□□□□ -0.82
SS18-219ENST00000581570 OR2H2O95918 312 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 CYB5AP00167 134 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 GPR12P47775 334 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 RAB7AP51149 207 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 ACTR3P61158 418 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 DIAPH2-AS1Q14236 149 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 C17orf58Q2M2W7 97 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 C16orf89Q6UX73 402 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 ZNF429Q86V71 674 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 OR8H3Q8N146 312 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 GIPC3Q8TF64 312 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 TM2D3Q9BRN9 247 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 ABCG5Q9H222 651 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 EDA2RQ9HAV5 297 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 EXOSC4Q9NPD3 245 aaKnown RBP9.94□□□□□ -0.82
SS18-219ENST00000581570 GSTK1Q9Y2Q3 226 aa9.94□□□□□ -0.82
SS18-219ENST00000581570 JTBO76095 146 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 SERPINA3P01011 423 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 IGHV3-7P01780 117 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 OR8U8P0C7N1 319 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 CCL1P22362 96 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 POU3F4P49335 361 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 ATP1B3P54709 279 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 CDK5Q00535 292 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 MADCAM1Q13477 382 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 ODF4Q2M2E3 257 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 KRBOX4Q5JUW0 171 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 ZNF322Q6U7Q0 402 aaPredicted RBP9.93□□□□□ -0.82
SS18-219ENST00000581570 PLEKHG7Q6ZR37 379 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 TGIF2LXQ8IUE1 241 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 PGAM4Q8N0Y7 254 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 KIRREL1Q96J84 757 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 CCDC134Q9H6E4 229 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 HMG20AQ9NP66 347 aa9.93□□□□□ -0.82
SS18-219ENST00000581570 LIN7CQ9NUP9 197 aaKnown RBP9.93□□□□□ -0.82
SS18-219ENST00000581570 KBTBD11-OT1A0A1B0GTJ5 212 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 CCDC182A6NF36 153 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 TRIM64CA6NLI5 447 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 LDLRAD4O15165 306 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 SYT7O43581 403 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 RRP9O43818 475 aaKnown RBP9.92□□□□□ -0.82
SS18-219ENST00000581570 IGHG4P01861 327 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 GP9P14770 177 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 SPNP16150 400 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 ATP6V1B2P21281 511 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 VEGFCP49767 419 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 RBP2P50120 134 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 CXCR4P61073 352 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 SCN1BQ07699 218 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 BNIP1Q12981 228 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 EBI3Q14213 229 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 OR1N2Q8NGR9 330 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 HAVCR2Q8TDQ0 301 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 LEAP2Q969E1 77 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 COQ2Q96H96 371 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 EAF1Q96JC9 268 aaPredicted RBP9.92□□□□□ -0.82
SS18-219ENST00000581570 TEX12Q9BXU0 123 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 CHST5Q9GZS9 411 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 MAGIXQ9H6Y5 334 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 ISYNA1Q9NPH2 558 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 OR6C3Q9NZP0 311 aa9.92□□□□□ -0.82
SS18-219ENST00000581570 TCRBV5S2A0A599 114 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 MPZL2O60487 215 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 SAP30O75446 220 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 CSN2P05814 226 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 OSMP13725 252 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 ZNF44P15621 663 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 VDAC1P21796 283 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 MTCP1P56278 107 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 CFHR3Q02985 330 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 ZNF616Q08AN1 781 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 GK3PQ14409 553 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 ASPHD1Q5U4P2 390 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 TMEM236Q5W0B7 351 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 MOB3BQ86TA1 216 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 Q8N9W7 124 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 DNAAF1Q8NEP3 725 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 CNN2Q99439 309 aaKnown RBP9.91□□□□□ -0.82
SS18-219ENST00000581570 ADI1Q9BV57 179 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 KRT84Q9NSB2 600 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 TVP23BQ9NYZ1 205 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 IDI2-AS1Q9NZ38 188 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 ACTR3BQ9P1U1 418 aa9.91□□□□□ -0.82
SS18-219ENST00000581570 MRM2Q9UI43 246 aaKnown RBP9.91□□□□□ -0.82
SS18-219ENST00000581570 PSG11Q9UQ72 335 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms