RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 TRBV23-1A0A0A0MS06 115 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 TRAV24A0A0B4J272 114 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 TMEM127O75204 238 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 GABARAPO95166 117 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 IL1AP01583 271 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 SLC2A2P11168 524 aaPredicted RBP12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 ERP29P30040 261 aaKnown RBP12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 TGFBR1P36897 503 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 RPS19P39019 145 aaKnown RBP12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 SERPINB10P48595 397 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 EDDM3BP56851 147 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 VBP1P61758 197 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 RPL31P62899 125 aaKnown RBP12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 RPS27AP62979 156 aaKnown RBP12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 PAX8Q06710 450 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 FAM189A2Q15884 450 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 PAN3Q58A45 887 aaKnown RBP12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 ATAD3CQ5T2N8 411 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 SFXN4Q6P4A7 337 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 SLC16A12Q6ZSM3 486 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 Q71RC1 249 aaPredicted RBP12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 CLVS1Q8IUQ0 354 aaPredicted RBP12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 OR4M1Q8NGD0 313 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 NAA50Q9GZZ1 169 aaKnown RBP12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 LIN7BQ9HAP6 207 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 TMEM160Q9NX00 188 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 DAPK2Q9UIK4 370 aa12.87□□□□□ -0.35
SLC6A4-205ENST00000579221 A0A1W2PPH5 198 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 A0A1W2PQ09 198 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 MCRIP1C9JLW8 97 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 FUT3P21217 361 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 OR3A1P47881 315 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 KCNJ3P48549 501 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 NCS1P62166 190 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 MEF2CQ06413 473 aaPredicted RBP12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 UNC119Q13432 240 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 EDDM3AQ14507 147 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 CTF1Q16619 201 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 CR1LQ2VPA4 569 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 IDNKQ5T6J7 187 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 FAM185AQ8N0U4 392 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 SUMF2Q8NBJ7 301 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 DACT3Q96B18 629 aaPredicted RBP12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 NEDD4LQ96PU5 975 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 DPCDQ9BVM2 203 aaPredicted RBP12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 TM2D1Q9BX74 207 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 BARHL1Q9BZE3 327 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 PPA2Q9H2U2 334 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 KCNK15Q9H427 330 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 LPAR3Q9UBY5 353 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 AUP1Q9Y679 476 aa12.86□□□□□ -0.35
SLC6A4-205ENST00000579221 VPS13CQ709C8 3753 aa12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 YLPM1P49750 1951 aaKnown RBP12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 TMEM272A0A1B0GTI8 110 aa12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 HAX1O00165 279 aa12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 HSPB6O14558 160 aa12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 LDLRAD4O15165 306 aa12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 CSN2P05814 226 aa12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 GLAP06280 429 aa12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 TMBIM6P55061 237 aa12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 RBM39Q14498 530 aaKnown RBP12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 TMEM200BQ69YZ2 307 aa12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 CMTM4Q8IZR5 234 aa12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 BPIFB2Q8N4F0 458 aa12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 TEX29Q8N6K0 151 aa12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 BCL7BQ9BQE9 202 aa12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 TMPRSS13Q9BYE2 586 aa12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 PEX16Q9Y5Y5 336 aa12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 MAP1AP78559 2803 aaPredicted RBP12.85□□□□□ -0.35
SLC6A4-205ENST00000579221 hADV38S2A0JD32 116 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 NOL3O60936 208 aaKnown RBP12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 RAB6AP20340 208 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 HNF1AP20823 631 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 ARF6P62330 175 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 AESQ08117 197 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 BLMHQ13867 455 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 KRBOX4Q5JUW0 171 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 RAB12Q6IQ22 244 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 BRICD5Q6PL45 260 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 METAP1DQ6UB28 335 aaPredicted RBP12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 USP43Q70EL4 1123 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 FAM89BQ8N5H3 189 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 NEK7Q8TDX7 302 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 RAB2BQ8WUD1 216 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 PTX4Q96A99 478 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 LPAR5Q9H1C0 372 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 C19orf12Q9NSK7 152 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 ZNF581Q9P0T4 197 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 ONECUT1Q9UBC0 465 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 KPTNQ9Y664 436 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 MAST4O15021 2626 aa12.84□□□□□ -0.35
SLC6A4-205ENST00000579221 A0A0B4J203 849 aa12.83□□□□□ -0.36
SLC6A4-205ENST00000579221 METTL21EPA6NDL7 271 aa12.83□□□□□ -0.36
SLC6A4-205ENST00000579221 PDCD6O75340 191 aa12.83□□□□□ -0.36
SLC6A4-205ENST00000579221 TOX4O94842 621 aa12.83□□□□□ -0.36
SLC6A4-205ENST00000579221 SNRPBP14678 240 aaKnown RBP12.83□□□□□ -0.36
SLC6A4-205ENST00000579221 BLVRBP30043 206 aaPredicted RBP12.83□□□□□ -0.36
SLC6A4-205ENST00000579221 GLIPR1P48060 266 aa12.83□□□□□ -0.36
SLC6A4-205ENST00000579221 P2RX3P56373 397 aa12.83□□□□□ -0.36
SLC6A4-205ENST00000579221 SCAND1P57086 179 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms